bio_tools 0.1.1

Install, run, and inspect computational biology and chemistry tools, e.g. AlphaFold, Boltz, RFdiffusion, and ProteinMPNN
Documentation
{
  "fields": [
    {
      "name": "job_name",
      "label": "Job name",
      "kind": "text",
      "default": "af3-demo",
      "required": false,
      "help": "",
      "options": [],
      "rows": null,
      "minimum": null,
      "maximum": null,
      "step": null,
      "maxlength": null,
      "accept": "",
      "task": ""
    },
    {
      "name": "protein_sequence",
      "label": "Protein sequence",
      "kind": "textarea",
      "default": "MSTNPKPQRKTKRNTNRRPQDVKFPGG",
      "required": true,
      "help": "",
      "options": [],
      "rows": 7,
      "minimum": null,
      "maximum": null,
      "step": null,
      "maxlength": null,
      "accept": "",
      "task": ""
    },
    {
      "name": "ligand_smiles",
      "label": "Ligand SMILES (optional)",
      "kind": "text",
      "default": "",
      "required": false,
      "help": "",
      "options": [],
      "rows": null,
      "minimum": null,
      "maximum": null,
      "step": null,
      "maxlength": null,
      "accept": "",
      "task": ""
    },
    {
      "name": "model_seeds",
      "label": "Model seeds",
      "kind": "text",
      "default": "1",
      "required": true,
      "help": "Comma-separated non-negative integers.",
      "options": [],
      "rows": null,
      "minimum": null,
      "maximum": null,
      "step": null,
      "maxlength": null,
      "accept": "",
      "task": ""
    },
    {
      "name": "run_data_pipeline",
      "label": "Run data pipeline",
      "kind": "checkbox",
      "default": true,
      "required": false,
      "help": "",
      "options": [],
      "rows": null,
      "minimum": null,
      "maximum": null,
      "step": null,
      "maxlength": null,
      "accept": "",
      "task": ""
    },
    {
      "name": "run_inference",
      "label": "Run inference",
      "kind": "checkbox",
      "default": true,
      "required": false,
      "help": "",
      "options": [],
      "rows": null,
      "minimum": null,
      "maximum": null,
      "step": null,
      "maxlength": null,
      "accept": "",
      "task": ""
    }
  ],
  "tasks": []
}