List of all items
Structs
- config::FeaturesConfig
- config::FileConfig
- config::HillsConfig
- config::HillsMs2Overrides
- config::KothConfig
- config::OutputConfig
- config::ScoringConfig
- features::recalibration::MzRecalBuilder
- features::recalibration::MzRecalModel
- hills::active::ActiveHill
- hills::detector::HillDetector
- models::Feature
- models::Hill
- models::IsolationWindow
- models::Peak
- models::ScoredFeature
- models::Spectrum
- pipeline::FeatureFindingOutput
- pipeline::PipelineOptions
- scoring::elements::ElementCache
- scoring::model::IsotopeModel
Enums
- config::CosineAnchor
- config::ImToleranceType
- config::MobilityScale
- config::OutputFormat
- config::ToleranceType
- error::Error
- hills::tic_norm::RefMode
- models::Polarity
- scoring::model::IsotopeClass
- scoring::model::IsotopeModelSpec
Traits
Functions
- features::cosine::cosine_similarity
- features::detect_features
- features::detect_features_with_recal
- features::learn_recal_model
- hills::assign_hill_ids
- hills::detect_hills
- hills::detect_hills_from_iter
- hills::detect_ms2_hills_from_iter
- hills::filter::filter_large_baseline_hills
- hills::noise::filter_spectrum
- hills::smooth::apply_intensity_filters
- hills::smooth::compute_hill_score
- hills::smooth::fill_gaps
- hills::smooth::running_average
- hills::split::split_coeluting
- hills::split::split_hill_persistence
- hills::tic_norm::normalize_tic_in_place
- mem::log_mem
- mem::rss_mb
- pipeline::group_ms2_hills_by_window
- pipeline::run_pipeline_from_hills
- pipeline::run_pipeline_from_spectra
- pipeline::run_pipeline_streaming_from_spectra
- run_features
- run_hills
- run_scoring
- scoring::averagine::bhattacharyya_score
- scoring::averagine::bhattacharyya_score_best_sulfur
- scoring::averagine::resolve_sulfur_counts
- scoring::elements::cache
- scoring::score_features
- shuffle_if_decoy
- stats::median
- stats::std_dev