Struct HillsMs2Overrides 

pub struct HillsMs2Overrides {

    pub min_scans: Option<usize>,
    pub max_gap: Option<usize>,
    pub split_hills: Option<bool>,
    pub split_valley_ratio: Option<f64>,
    pub split_sigma_mult: Option<f64>,
    pub split_height_frac: Option<f64>,
    pub lfc_weight: Option<f64>,
    pub gap_fill_enabled: Option<bool>,
    pub smoothing_enabled: Option<bool>,
    pub smoothing_window: Option<usize>,
    pub filter_large_baseline_hills: Option<bool>,
    pub large_hill_min_scans: Option<usize>,
    pub large_hill_peak_factor: Option<f64>,
    pub tic_norm_window: Option<usize>,
    pub tic_norm_min_scale: Option<f64>,
    pub tic_norm_max_scale: Option<f64>,
    pub tic_norm_mode: Option<String>,
}

Per-field overrides applied to MS2 (DIA fragment) hill detection.

Override semantics. MS2 hill detection inherits the user’s entire [hills] config and then overwrites only the fields set here. A field left None (absent from [hills_ms2] in the TOML) keeps its [hills] value — it does not fall back to HillsConfig::default. When the whole [hills_ms2] table is absent, MS2 uses [hills] verbatim (see super::KothConfig::ms2_hills), which is byte-for-byte the pre-existing behavior.

Every field mirrors the same-named field on HillsConfig; see there for what each one does.

Fields

min_scans: Option<usize>

max_gap: Option<usize>

split_hills: Option<bool>

split_valley_ratio: Option<f64>

split_sigma_mult: Option<f64>

split_height_frac: Option<f64>

lfc_weight: Option<f64>

gap_fill_enabled: Option<bool>

smoothing_enabled: Option<bool>

smoothing_window: Option<usize>

filter_large_baseline_hills: Option<bool>

large_hill_min_scans: Option<usize>

large_hill_peak_factor: Option<f64>

tic_norm_window: Option<usize>

tic_norm_min_scale: Option<f64>

tic_norm_max_scale: Option<f64>

tic_norm_mode: Option<String>

Implementations

impl HillsMs2Overrides

pub fn apply_to(&self, base: &HillsConfig) -> HillsConfig

Return a copy of base ([hills]) with each Some(..) override applied. Fields left None keep their base value.

Trait Implementations

impl Clone for HillsMs2Overrides

fn clone(&self) -> Self

Returns a duplicate of the value.

fn clone_from(&mut self, source: &Self)

Performs copy-assignment from source.

impl Debug for HillsMs2Overrides

fn fmt(&self, f: &mut Formatter<'_>) -> Result

Formats the value using the given formatter.

impl Default for HillsMs2Overrides

fn default() -> Self

Returns the “default value” for a type.

impl<'de> Deserialize<'de> for HillsMs2Overrides

where HillsMs2Overrides: Default,

fn deserialize<__D>(__deserializer: __D) -> Result<Self, __D::Error>

where __D: Deserializer<'de>,

Deserialize this value from the given Serde deserializer.

impl Serialize for HillsMs2Overrides

fn serialize<__S>(&self, __serializer: __S) -> Result<__S::Ok, __S::Error>

where __S: Serializer,

Serialize this value into the given Serde serializer.