Struct XCellModel 

pub struct XCellModel {
    pub signatures: GeneSets,
    pub genes: Vec<String>,
    pub cell_types: Vec<String>,
    pub spill: SpillModel,
    pub spill_array: SpillModel,
}

The full xCell model: signatures, gene universe, canonical cell-type order, and both spill objects (RNA-seq and microarray).

Fields

signatures: GeneSets

The 489 xCell signatures, named cellType%source%idx.txt.

genes: Vec<String>

The 10 808-symbol scoring universe (xCell.data$genes).

cell_types: Vec<String>

64 cell types in xCell’s canonical (R aggregate() / sorted) output order — the row order of rawEnrichmentAnalysis.

spill: SpillModel

Spill object used when rnaseq = true (xCell.data$spill).

spill_array: SpillModel

Spill object used when rnaseq = false (xCell.data$spill.array).

Implementations

impl XCellModel

pub fn load() -> Self

Parse the embedded xCell data. Cheap enough to call once per analysis.

pub fn spill_for(&self, rnaseq: bool) -> &SpillModel

The spill object for the chosen platform (rnaseq = true → RNA-seq).