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SpillModel

Struct SpillModel 

Source
pub struct SpillModel {
    pub k: ExprMatrix,
    pub fv: ExprMatrix,
}
Expand description

One xCell “spill” object: the spillover matrix k (cell types × cell types) and the calibration table fv (cell types × [V1, V2, V3]). Both are indexed by cell-type name, mirroring R’s by-name matrix indexing.

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§k: ExprMatrix

Spillover matrix, square, rows and columns labelled by cell type in xCell’s canonical order.

§fv: ExprMatrix

Calibration table; columns are V1, V2, V3. transformScores uses only V2 (the exponent) and V3 (the scale divisor); V1 is unused.

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impl SpillModel

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pub fn v2(&self, cell_type: &str) -> Option<f64>

V2 (the transform exponent) for a cell type, if present in fv.

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pub fn v3(&self, cell_type: &str) -> Option<f64>

V3 (the transform scale divisor) for a cell type, if present in fv.

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