Struct GeneSets 

pub struct GeneSets {
    pub sets: Vec<GeneSet>,
}

An ordered collection of GeneSets.

Fields

sets: Vec<GeneSet>

The gene sets, in order.

Implementations

impl GeneSets

pub fn new(sets: Vec<GeneSet>) -> GeneSets

Wrap a vector of gene sets.

pub fn from_gmt(text: &str) -> GeneSets

Parse gene sets from GMT text.

GMT is tab-separated: column 1 is the set name, column 2 a description (ignored), and the remaining columns are gene identifiers. Blank lines are skipped, and empty trailing gene cells (a common artifact of trailing tabs) are dropped.

pub fn len(&self) -> usize

Number of gene sets.

pub fn is_empty(&self) -> bool

Whether there are no gene sets.

pub fn iter(&self) -> Iter<'_, GeneSet>

Iterate over the gene sets.

Trait Implementations

impl Clone for GeneSets

fn clone(&self) -> GeneSets

Returns a duplicate of the value.

fn clone_from(&mut self, source: &Self)

Performs copy-assignment from source.

impl Debug for GeneSets

fn fmt(&self, f: &mut Formatter<'_>) -> Result<(), Error>

Formats the value using the given formatter.

impl Default for GeneSets

fn default() -> GeneSets

Returns the “default value” for a type.

impl PartialEq for GeneSets

fn eq(&self, other: &GeneSets) -> bool

Tests for self and other values to be equal, and is used by ==.

fn ne(&self, other: &Rhs) -> bool

Tests for !=. The default implementation is almost always sufficient, and should not be overridden without very good reason.

impl Eq for GeneSets

impl StructuralPartialEq for GeneSets