Struct Germlines 

pub struct Germlines {
    pub species: Species,
    pub h: Chain,
    pub k: Chain,
    pub l: Chain,
    pub i: Chain,
}

A selection of germlines from a single species.

Fields

species: Species

The species of this selection of germlines

h: Chain

All heavy chain options

k: Chain

All kappa light chain options

l: Chain

All lambda light chain options

i: Chain

All iota chain options

Implementations

impl Germlines

pub fn new(species: Species) -> Self

Create a new empty collection

pub fn insert(&mut self, germline: Germline)

Insert a germline into this collection

impl Germlines

pub fn iter( &self, ) -> impl DoubleEndedIterator<Item = (ChainType, &Chain)> + ExactSizeIterator + '_

Iterate over the chains

impl Germlines

pub fn find_allele( &self, gene: Gene, allele: Option<usize>, ) -> Option<Allele<'_>>

Find a specific allele.

pub fn find_germline(&self, gene: Gene) -> Option<Arc<Germline>>

Find a specific germline.

pub fn remove_germline(&mut self, gene: Gene)

Remove a specific germline.

Trait Implementations

impl<'__de, __Context> BorrowDecode<'__de, __Context> for Germlines

fn borrow_decode<__D: BorrowDecoder<'__de, Context = __Context>>( decoder: &mut __D, ) -> Result<Self, DecodeError>

Attempt to decode this type with the given BorrowDecode.

impl Debug for Germlines

fn fmt(&self, f: &mut Formatter<'_>) -> Result

Formats the value using the given formatter.

impl<__Context> Decode<__Context> for Germlines

fn decode<__D: Decoder<Context = __Context>>( decoder: &mut __D, ) -> Result<Self, DecodeError>

Attempt to decode this type with the given Decode.

impl<'de> Deserialize<'de> for Germlines

fn deserialize<__D>(__deserializer: __D) -> Result<Self, __D::Error>

where __D: Deserializer<'de>,

Deserialize this value from the given Serde deserializer.

impl Encode for Germlines

fn encode<__E: Encoder>(&self, encoder: &mut __E) -> Result<(), EncodeError>

Encode a given type.

impl<'a> IntoIterator for &'a Germlines

type IntoIter = IntoIter<(ChainType, &'a Chain), 4>

Which kind of iterator are we turning this into?

type Item = (ChainType, &'a Chain)

The type of the elements being iterated over.

fn into_iter(self) -> Self::IntoIter

Creates an iterator from a value.

impl<'a> IntoParallelIterator for &'a Germlines

Available on crate feature rayon only.

type Iter = IntoIter<(ChainType, &'a Chain), 4>

The parallel iterator type that will be created.

type Item = (ChainType, &'a Chain)

The type of item that the parallel iterator will produce.

fn into_par_iter(self) -> Self::Iter

Converts self into a parallel iterator.

impl Serialize for Germlines

fn serialize<__S>(&self, __serializer: __S) -> Result<__S::Ok, __S::Error>

where __S: Serializer,

Serialize this value into the given Serde serializer.