#![allow(clippy::missing_panics_doc)]
use std::io::BufReader;
use crate::{ProteoscapeData, ProteoscapeVersion, test_format};
#[test]
fn proteoscape_db_v2025b() {
match test_format::<ProteoscapeData>(
BufReader::new(DATABASE_V2025B.as_bytes()),
&mzcore::ontology::STATIC_ONTOLOGIES,
true,
false,
Some(ProteoscapeVersion::V2025b),
) {
Ok(n) => assert_eq!(n, 22),
Err(e) => {
println!("{e}");
panic!("Failed identified peptides test");
}
}
}
const DATABASE_V2025B: &str = r"MS2 Id Peptide Sequence XCorr Score Precursor MZ PPM Error Rt Corrected Ook0 Protein Group Name Charge Delta CN Score Confidence Score Calculated MH Matched Ions Predicted Ook0 TIMScore Is Unique
15792 VDK.AAAAAAALQAK.SDE 3.1078 478.7798 -0.1 1628.426 0.873 sp|P36578|RL4_HUMAN 2 0.7032 100 956.5524 13 0.8272 0.0011 true
121169 EAR.AAAAATVVPPMVGGPPFVGPVGFGPGDR.SHL 1.8697 864.4537 -0.9 4008.8481 0.9425 sp|Q9BTD8|RBM42_HUMAN 3 1 100 2591.344 31 1.0109 0.0119 true
121232 EAR.AAAAATVVPPMVGGPPFVGPVGFGPGDR.SHL 1.5348 864.4521 0.8 4010.0198 0.9398 sp|Q9BTD8|RBM42_HUMAN 3 1 100 2591.344 21 1.0109 0.0087 true
25059 RKK.AAAAAWEEPSSGNGTAR.AGP 3.8022 823.3837 -2.2 1920.2656 1.0245 sp|Q9P258|RCC2_HUMAN 2 0.8512 100 1645.7565 18 1.0193 0.7516 true
25138 RKK.AAAAAWEEPSSGNGTAR.AGP 4.4585 823.3828 -1 1922.6124 1.0223 sp|Q9P258|RCC2_HUMAN 2 0.8501 100 1645.7565 21 1.0193 0.857 true
42217 GGR.AAAAPGASPSPGGDAAWSEAGPGPR.PLA 2.7239 1103.0178 1.7 2365.6448 1.2263 sp|P52701|MSH6_HUMAN 2 0.9049 100 2205.032 19 1.1802 0.0193 true
42243 GGR.AAAAPGASPSPGGDAAWSEAGPGPR.PLA 1.9742 1103.0189 0.7 2366.8169 1.1975 sp|P52701|MSH6_HUMAN 2 1 100 2205.032 12 1.1802 0.3703 true
59151 ARR.AAAASAAEAGIATTGTEDSDDALLK.MTI 5.3434 1160.5608 0.3 2731.3401 1.2929 sp|P55036|PSMD4_HUMAN 2 0.8754 100 2320.115 27 1.3031 0.6237 true
59253 ARR.AAAASAAEAGIATTGTEDSDDALLK.MTI 6.0643 1160.5599 1.1 2733.6838 1.292 sp|P55036|PSMD4_HUMAN 2 0.872 100 2320.115 27 1.3031 0.5929 true
60502 ARR.AAAASAAEAGIATTGTEDSDDALLK.MTI 4.4546 1160.5599 1.1 2758.2952 1.2911 sp|P55036|PSMD4_HUMAN 2 0.8607 100 2320.115 22 1.3031 0.5645 true
45498 IAR.AAADTLQGPMQAAYR.EAF 3.7973 782.3817 1.5 2441.8257 1.0267 sp|Q6P2E9|EDC4_HUMAN 2 0.7688 100 1563.7584 18 1.022 0.7781 true
37215 MKK.AAAEDVNVTFEDQQK.INK 6.0561 832.893 -1.5 2246.0984 1.0432 sp|Q9NQP4|PFD4_HUMAN 2 0.8267 100 1664.7762 19 1.052 0.6016 true
37953 MKK.AAAEDVNVTFEDQQK.INK 2.6239 832.8956 -4.6 2263.6777 1.0626 sp|Q9NQP4|PFD4_HUMAN 2 0.8337 100 1664.7762 11 1.052 0.5343 true
38570 MKK.AAAEDVNVTFEDQQK.INK 0.7014 832.8986 -8.1 2277.7429 1.0636 sp|Q9NQP4|PFD4_HUMAN 2 1 99.6826 1664.7762 11 1.052 0.495 true
41388 KRK.AAAEELQEAAGAGDGATENGVQPPK.AAA 3.5983 1191.0608 3.1 2346.8936 1.2403 sp|Q9H9Y2|RPF1_HUMAN 2 1 100 2381.1216 21 1.249 0.663 true
41488 KRK.AAAEELQEAAGAGDGATENGVQPPK.AAA 3.2142 1191.0664 -1.6 2349.2373 1.2382 sp|Q9H9Y2|RPF1_HUMAN 2 0.9451 100 2381.1216 20 1.249 0.5864 true
134822 DEK.AAAEIYEEFLAAFEGSDGNK.VKT 5.8089 1066.4958 -1.1 4379.2158 1.1853 sp|O15042|SR140_HUMAN 2 0.8735 100 2131.9819 18 1.2216 0.0562 true
134921 DEK.AAAEIYEEFLAAFEGSDGNK.VKT 6.4211 1066.496 -1.3 4382.7314 1.1812 sp|O15042|SR140_HUMAN 2 0.8502 100 2131.9819 19 1.2216 0.0331 true
134887 DEK.AAAEIYEEFLAAFEGSDGNK.VKT 2.3767 711.3308 1.9 4381.5596 0.9331 sp|O15042|SR140_HUMAN 3 1 100 2131.9819 30 0.9497 0.5366 true
17575 -MK.C(57.021464)HYEALGVR.RDA 1.2532 552.7726 -11.3 1688.2001 0.8953 sp|Q5F1R6|DJC21_HUMAN 2 0.8925 99.9463 1104.5255 8 0.877 0.2015 true
129943 VDK.C(57.021464)LADGADEHLQLISLC(57.021464)ATVMQQLSQNC.--- 1.3056 1025.8051 -0.2 4235.0503 1.0765 sp|P35249|RFC4_HUMAN 3 1 0 3075.4001 19 1.1364 0.0535 true
18238 FFK.DGLEMEK.C-- 0.752 411.1872 4.5 1710.4712 0.7371 sp|P13693|TCTP_HUMAN 2 0.7661 99.2689 821.3709 7 0.7357 0.9064 true";