[
{
"id": "carbonic_anhydrase_2cba",
"label": "Protein \u00b7 carbonic anhydrase",
"description": "Official ESMFold2 protein example (PDB 2CBA), using the released local API's 100-step example setting.",
"source_url": "https://github.com/Biohub/esm/blob/bf343ba264b650dff7a073643725f9aaa1fdbe8d/README.md",
"values": {
"job_name": "esmfold2-2cba",
"input_json": "{\n \"sequences\": [\n {\n \"type\": \"protein\",\n \"id\": \"A\",\n \"sequence\": \"MSHHWGYGKHNGPEHWHKDFPIAKGERQSPVDIDTHTAKYDPSLKPLSVSYDQATSLRILNNGHAFNVEFDDSQDKAVLKGGPLDGTYRLIQFHFHWGSLDGQGSEHTVDKKKYAAELHLVHWNTKYGDFGKAVQQPDGLAVLGIFLKVGSAKPGLQKVVDVLDSIKTKGKSADFTNFDPRGLLPESLDYWTYPGSLTTPPLLECVTWIVLKEPISVSSEQVLKFRKLNFNGEGEPEELMVDNWRPAQPLKNRQIKASFK\"\n }\n ]\n}",
"num_sampling_steps": 100,
"input_mode": "text"
}
},
{
"id": "protein_dna_ligand_1mht",
"label": "Protein\u2013DNA\u2013ligand \u00b7 1MHT",
"description": "Official local ESMFold2 example with protein HHAI, modified DNA, and CCD ligand SAH.",
"source_url": "https://github.com/Biohub/esm/blob/bf343ba264b650dff7a073643725f9aaa1fdbe8d/README.md#running-esmfold2-through-hugging-face",
"values": {
"job_name": "esmfold2-1mht",
"input_json": "{\n \"sequences\": [\n {\n \"type\": \"protein\",\n \"id\": \"A\",\n \"sequence\": \"MIEIKDKQLTGLRFIDLFAGLGGFRLALESCGAECVYSNEWDKYAQEVYEMNFGEKPEGDITQVNEKTIPDHDILCAGFPCQAFSISGKQKGFEDSRGTLFFDIARIVREKKPKVVFMENVKNFASHDNGNTLEVVKNTMNELDYSFHAKVLNALDYGIPQKRERIYMICFRNDLNIQNFQFPKPFELNTFVKDLLLPDSEVEHLVIDRKDLVMTNQEIEQTTPKTVRLGIVGKGGQGERIYSTRGIAITLSAYGGGIFAKTGGYLVNGKTRKLHPRECARVMGYPDSYKVHPSTSQAYKQFGNSVVINVLQYIAYNIGSSLNFKPY\"\n },\n {\n \"type\": \"dna\",\n \"id\": \"B\",\n \"sequence\": \"GATAGCGCTATC\",\n \"modifications\": [{\"position\": 5, \"ccd\": \"C36\"}]\n },\n {\n \"type\": \"dna\",\n \"id\": \"C\",\n \"sequence\": \"TGATAGCGCTATC\",\n \"modifications\": [{\"position\": 6, \"ccd\": \"C36\"}]\n },\n {\n \"type\": \"ligand\",\n \"id\": \"L\",\n \"ccd\": [\"SAH\"]\n }\n ]\n}",
"num_sampling_steps": 100,
"input_mode": "text"
}
}
]