Struct MinimizerTupleExternal 

#[repr(C, packed(2))]
pub struct MinimizerTupleExternal {
    pub minimizer: u64,
    pub pos_in_seq: u64,
    pub pos_in_kmer: u8,
    pub num_kmers_in_super_kmer: u8,
}

Packed minimizer tuple for disk I/O (matches C++ #pragma pack(push, 2))

Layout: minimizer (8) + pos_in_seq (8) + pos_in_kmer (1) + num_kmers_in_super_kmer (1) = 18 bytes

Fields

minimizer: u64

The minimizer hash value

pos_in_seq: u64

Position in the sequence

pos_in_kmer: u8

Position of the minimizer within the k-mer

num_kmers_in_super_kmer: u8

Number of k-mers in the super-k-mer

Implementations

impl MinimizerTupleExternal

pub fn from_internal(t: &MinimizerTuple) -> Self

Convert from internal MinimizerTuple

pub fn to_internal(&self) -> MinimizerTuple

Convert to internal MinimizerTuple

pub unsafe fn from_bytes(bytes: *const u8) -> Self

Read from bytes (unsafe, assumes correct alignment)

Safety

Caller must ensure bytes points to a valid MinimizerTupleExternal

pub fn to_bytes(&self) -> [u8; 18]

Write to bytes

Trait Implementations

impl Clone for MinimizerTupleExternal

fn clone(&self) -> MinimizerTupleExternal

Returns a duplicate of the value.

fn clone_from(&mut self, source: &Self)

Performs copy-assignment from source.

impl Debug for MinimizerTupleExternal

fn fmt(&self, f: &mut Formatter<'_>) -> Result

Formats the value using the given formatter.

impl Ord for MinimizerTupleExternal

fn cmp(&self, other: &Self) -> Ordering

This method returns an Ordering between self and other.

fn max(self, other: Self) -> Self

where Self: Sized,

Compares and returns the maximum of two values.

fn min(self, other: Self) -> Self

where Self: Sized,

Compares and returns the minimum of two values.

fn clamp(self, min: Self, max: Self) -> Self

where Self: Sized,

Restrict a value to a certain interval.

impl PartialEq for MinimizerTupleExternal

fn eq(&self, other: &MinimizerTupleExternal) -> bool

Tests for self and other values to be equal, and is used by ==.

fn ne(&self, other: &Rhs) -> bool

Tests for !=. The default implementation is almost always sufficient, and should not be overridden without very good reason.

impl PartialOrd for MinimizerTupleExternal

fn partial_cmp(&self, other: &Self) -> Option<Ordering>

This method returns an ordering between self and other values if one exists.

fn lt(&self, other: &Rhs) -> bool

Tests less than (for self and other) and is used by the < operator.

fn le(&self, other: &Rhs) -> bool

Tests less than or equal to (for self and other) and is used by the <= operator.

fn gt(&self, other: &Rhs) -> bool

Tests greater than (for self and other) and is used by the > operator.

fn ge(&self, other: &Rhs) -> bool

Tests greater than or equal to (for self and other) and is used by the >= operator.

impl Copy for MinimizerTupleExternal

impl Eq for MinimizerTupleExternal

impl StructuralPartialEq for MinimizerTupleExternal