Struct Reader 

pub struct Reader { /* private fields */ }

A site reader.

Implementations

impl Reader

pub fn create_zero_scs(&self) -> Scs

Returns a spectrum filled with zeros corresponding to the shape defined by the reader configuration.

pub fn current_contig(&self) -> &str

Returns the current contig of the reader.

pub fn current_position(&self) -> usize

Returns the current position of the reader within its current contig.

pub fn current_skipped_samples( &self, ) -> impl Iterator<Item = (&Sample, &Skipped)>

Returns an iterator over the currently skipped genotypes in the reader, with their associated samples.

pub fn read_site(&mut self) -> ReadStatus<Site<'_>>

Reads the next site in the reader.

pub fn samples(&self) -> &[Sample]

Returns the samples defined by the reader.