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NucPair

Struct NucPair 

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pub struct NucPair(/* private fields */);
Expand description

A pair of nucleotides (bit-packing for FM-index)

Represents two nucleotides packed into a single byte:

  • Bits 0-1: first nucleotide
  • Bits 2-3: second nucleotide
  • Bits 4-7: unused

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impl NucPair

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pub fn new(lo: Nuc, hi: Nuc) -> Self

Create a new nucleotide pair

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pub fn lo(self) -> Nuc

Get the low (first) nucleotide

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pub fn hi(self) -> Nuc

Get the high (second) nucleotide

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pub fn as_u8(self) -> u8

Get raw byte value

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pub fn from_u8(b: u8) -> Self

Create from raw byte

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impl Clone for NucPair

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fn clone(&self) -> NucPair

Returns a duplicate of the value. Read more
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fn clone_from(&mut self, source: &Self)

Performs copy-assignment from source. Read more
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impl Debug for NucPair

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fn fmt(&self, f: &mut Formatter<'_>) -> Result

Formats the value using the given formatter. Read more
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impl Default for NucPair

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fn default() -> NucPair

Returns the “default value” for a type. Read more
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impl PartialEq for NucPair

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fn eq(&self, other: &NucPair) -> bool

Tests for self and other values to be equal, and is used by ==.
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fn ne(&self, other: &Rhs) -> bool

Tests for !=. The default implementation is almost always sufficient, and should not be overridden without very good reason.
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impl Copy for NucPair

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impl Eq for NucPair

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impl StructuralPartialEq for NucPair

Auto Trait Implementations§

Blanket Implementations§

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impl<T> Any for T
where T: 'static + ?Sized,

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fn type_id(&self) -> TypeId

Gets the TypeId of self. Read more
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impl<T> Borrow<T> for T
where T: ?Sized,

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fn borrow(&self) -> &T

Immutably borrows from an owned value. Read more
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impl<T> BorrowMut<T> for T
where T: ?Sized,

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fn borrow_mut(&mut self) -> &mut T

Mutably borrows from an owned value. Read more
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impl<T> CloneToUninit for T
where T: Clone,

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unsafe fn clone_to_uninit(&self, dest: *mut u8)

🔬This is a nightly-only experimental API. (clone_to_uninit)
Performs copy-assignment from self to dest. Read more
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impl<T> From<T> for T

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fn from(t: T) -> T

Returns the argument unchanged.

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impl<T, U> Into<U> for T
where U: From<T>,

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fn into(self) -> U

Calls U::from(self).

That is, this conversion is whatever the implementation of From<T> for U chooses to do.

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impl<T> ToOwned for T
where T: Clone,

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type Owned = T

The resulting type after obtaining ownership.
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fn to_owned(&self) -> T

Creates owned data from borrowed data, usually by cloning. Read more
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fn clone_into(&self, target: &mut T)

Uses borrowed data to replace owned data, usually by cloning. Read more
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impl<T, U> TryFrom<U> for T
where U: Into<T>,

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type Error = Infallible

The type returned in the event of a conversion error.
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fn try_from(value: U) -> Result<T, <T as TryFrom<U>>::Error>

Performs the conversion.
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impl<T, U> TryInto<U> for T
where U: TryFrom<T>,

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type Error = <U as TryFrom<T>>::Error

The type returned in the event of a conversion error.
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fn try_into(self) -> Result<U, <U as TryFrom<T>>::Error>

Performs the conversion.