Struct rust_htslib::htslib::bam1_t

#[repr(C)]
pub struct bam1_t {
    pub core: bam1_core_t,
    pub l_data: c_int,
    pub m_data: u32,
    pub data: *mut u8,
    pub id: u64,
}

@typedef @abstract Structure for one alignment. @field core core information about the alignment @field l_data current length of bam1_t::data @field m_data maximum length of bam1_t::data @field data all variable-length data, concatenated; structure: qname-cigar-seq-qual-aux

@discussion Notes:

1. qname is terminated by one to four NULs, so that the following cigar data is 32-bit aligned; core.l_qname includes these trailing NULs, while core.l_extranul counts the excess NULs (so 0 <= l_extranul <= 3).
2. l_qseq is calculated from the total length of an alignment block on reading or from CIGAR.
3. cigar data is encoded 4 bytes per CIGAR operation.
4. seq is nybble-encoded according to bam_nt16_table.

Fields

core: bam1_core_t

l_data: c_int

m_data: u32

data: *mut u8

id: u64

Trait Implementations

impl Debug for bam1_t

fn fmt(&self, __arg_0: &mut Formatter) -> Result

Formats the value using the given formatter.

impl Copy for bam1_t

impl Clone for bam1_t

fn clone(&self) -> bam1_t

Returns a copy of the value.

fn clone_from(&mut self, source: &Self)

Performs copy-assignment from source.