Struct rust_htslib::htslib::bam1_core_t

#[repr(C)]
pub struct bam1_core_t {
    pub tid: i32,
    pub pos: i32,
    pub bin: u16,
    pub qual: u8,
    pub l_qname: u8,
    pub flag: u16,
    pub unused1: u8,
    pub l_extranul: u8,
    pub n_cigar: u32,
    pub l_qseq: i32,
    pub mtid: i32,
    pub mpos: i32,
    pub isize: i32,
}

@typedef @abstract Structure for core alignment information. @field tid chromosome ID, defined by bam_hdr_t @field pos 0-based leftmost coordinate @field bin bin calculated by bam_reg2bin() @field qual mapping quality @field l_qname length of the query name @field flag bitwise flag @field l_extranul length of extra NULs between qname & cigar (for alignment) @field n_cigar number of CIGAR operations @field l_qseq length of the query sequence (read) @field mtid chromosome ID of next read in template, defined by bam_hdr_t @field mpos 0-based leftmost coordinate of next read in template

Fields

tid: i32

pos: i32

bin: u16

qual: u8

l_qname: u8

flag: u16

unused1: u8

l_extranul: u8

n_cigar: u32

l_qseq: i32

mtid: i32

mpos: i32

isize: i32

Trait Implementations

impl Debug for bam1_core_t

fn fmt(&self, __arg_0: &mut Formatter) -> Result

Formats the value using the given formatter.

impl Copy for bam1_core_t

impl Clone for bam1_core_t

fn clone(&self) -> bam1_core_t

Returns a copy of the value.

fn clone_from(&mut self, source: &Self)

Performs copy-assignment from source.