readfish-tools-0.1.0
- readfish-tools 0.1.0
- Permalink
- Docs.rs crate page
- MPL-2.0 OR GPL-3.0-only
- Links
- Repository
- crates.io
- Source
- Owners
- Adoni5
- Dependencies
- csv ^1.2.2 normal
  flate2 ^1.0.26 normal
  gzp ^0.11.3 normal
  itertools ^0.11.0 normal
  lazy_static ^1.4.0 normal
  linked-hash-map ^0.5.6 normal
  maplit ^1.0.2 normal
  natord ^1.0.9 normal
  ndarray ^0.15.6 normal
  num-format ^0.4.4 normal
  prettytable ^0.10.0 normal
  pyo3 ^0.19.1 normal
  rayon ^1.7.0 normal
  regex ^1.9.1 normal
  serde ^1.0 normal
  toml ^0.7.6 normal
- Versions
- 100% of the crate is documented
Platform
- x86_64-unknown-linux-gnu
Feature flags

docs.rs

Rust

All

readfish_tools0.1.0

Crate Items

Structs
Enums
Traits
Functions

List of all items

Structs

ConditionSummary
ContigSummary
MeanReadLengths
ReadfishSummary
Summary
paf::Metadata
paf::Paf
paf::PafRecord
readfish::Conf
readfish::CsvRecord
readfish::Region
readfish::Targets
readfish::_Condition

Enums

paf::Error
readfish::Action

Traits

readfish::Condition

Functions

_demultiplex_paf
nanopore::format_bases
nanopore::generate_flowcell
nanopore::get_coords
nanopore::running_mean
paf::_parse_paf_line
paf::open_paf_for_reading