Struct InputWindowing 

#[non_exhaustive]
pub struct InputWindowing {
    pub win: NonZeroUsize,
    pub step: NonZeroUsize,
}

This struct contains the options input to our modification-data-windowing functions

Example

use nanalogue_core::{Error, InputWindowingBuilder};

let window = InputWindowingBuilder::default()
    .win(20)
    .step(10).build()?;

Fields (Non-exhaustive)

Non-exhaustive structs could have additional fields added in future. Therefore, non-exhaustive structs cannot be constructed in external crates using the traditional Struct { .. } syntax; cannot be matched against without a wildcard ..; and struct update syntax will not work.

win: NonZeroUsize

size of window in units of base being queried i.e. if you are looking for cytosine modifications, then a window of a value 300 means create windows each with 300 cytosines irrespective of their modification status.

step: NonZeroUsize

step window by this size in units of base being queried.

Trait Implementations

impl Args for InputWindowing

fn group_id() -> Option<Id>

Report the ArgGroup::id for this set of arguments

fn augment_args<'b>(__clap_app: Command) -> Command

Append to Command so it can instantiate Self via FromArgMatches::from_arg_matches_mut

fn augment_args_for_update<'b>(__clap_app: Command) -> Command

Append to Command so it can instantiate self via FromArgMatches::update_from_arg_matches_mut

impl Clone for InputWindowing

fn clone(&self) -> InputWindowing

Returns a duplicate of the value.

fn clone_from(&mut self, source: &Self)

Performs copy-assignment from source.

impl Debug for InputWindowing

fn fmt(&self, f: &mut Formatter<'_>) -> Result

Formats the value using the given formatter.

impl Default for InputWindowing

Implements a default for InputWindowing. NOTE the defaults of 1 for each are just for ease of programming. We do not expose these defaults to the command-line user.

fn default() -> Self

Returns the “default value” for a type.

impl<'de> Deserialize<'de> for InputWindowing

where InputWindowing: Default,

fn deserialize<__D>(__deserializer: __D) -> Result<Self, __D::Error>

where __D: Deserializer<'de>,

Deserialize this value from the given Serde deserializer.

impl FromArgMatches for InputWindowing

fn from_arg_matches(__clap_arg_matches: &ArgMatches) -> Result<Self, Error>

Instantiate Self from ArgMatches, parsing the arguments as needed.

fn from_arg_matches_mut( __clap_arg_matches: &mut ArgMatches, ) -> Result<Self, Error>

Instantiate Self from ArgMatches, parsing the arguments as needed.

fn update_from_arg_matches( &mut self, __clap_arg_matches: &ArgMatches, ) -> Result<(), Error>

Assign values from ArgMatches to self.

fn update_from_arg_matches_mut( &mut self, __clap_arg_matches: &mut ArgMatches, ) -> Result<(), Error>

Assign values from ArgMatches to self.

impl Serialize for InputWindowing

fn serialize<__S>(&self, __serializer: __S) -> Result<__S::Ok, __S::Error>

where __S: Serializer,

Serialize this value into the given Serde serializer.

impl Copy for InputWindowing