Struct QueryEngine 

pub struct QueryEngine { /* private fields */ }

Implementations

impl QueryEngine

pub fn open<P: AsRef<Path>>(path: P) -> Result<Self, ReaderError>

pub fn threshold(&self) -> u64

pub fn kmer_size(&self) -> u8

pub fn bias_table(&self) -> Option<Arc<HashBiasTable>>

pub fn has_bias_table(&self) -> bool

pub fn reader(&self) -> &JamReader

pub fn query(&self, hashes: &[u64]) -> QueryResult

pub fn query_filtered( &self, hashes: &[u64], min_containment: f64, max_results: usize, ) -> QueryResult

pub fn query_batch(&self, queries: &[Vec<u64>]) -> Vec<QueryResult>

pub fn query_sketch(&self, sketch: &QuerySketch) -> Vec<QueryResult>

pub fn query_fasta<P: AsRef<Path>>( &self, input: P, singleton: bool, ) -> Result<Vec<QueryResult>, QueryError>