Struct JamReader 

pub struct JamReader { /* private fields */ }

Implementations

impl JamReader

pub fn open<P: AsRef<Path>>(path: P) -> Result<Self, ReaderError>

pub fn open_bucket_region( &self, bucket_idx: usize, ) -> Result<BucketRegion, ReaderError>

pub fn bucket_meta(&self, bucket_idx: usize) -> &BucketMeta

pub fn threshold(&self) -> u64

pub fn kmer_size(&self) -> u8

pub fn bias_table(&self) -> Option<Arc<HashBiasTable>>

pub fn has_bias_table(&self) -> bool

pub fn sample_names(&self) -> &[String]

pub fn sample_name(&self, id: u32) -> Option<&str>

pub fn sample_sizes(&self) -> &[u64]

pub fn sample_size(&self, id: u32) -> Option<u64>

pub fn stats(&self) -> ReaderStats

pub fn bucket_entries(&self, bucket_idx: usize) -> &[Entry]

pub fn bucket_entry_byte_range(&self, bucket_idx: usize) -> (usize, usize)

pub fn bucket_filter_byte_range(&self, bucket_idx: usize) -> (usize, usize)

pub fn release_pages(&self, start: usize, end: usize)

pub fn release_bucket(&self, bucket_idx: usize)

pub fn advise_random(&self)

pub fn bucket_filter(&self, bucket_idx: usize) -> Option<BucketFilter<'_>>

pub fn contains(&self, hash: u64) -> bool

pub fn search(&self, hash: u64) -> impl Iterator<Item = u32> + '_