rustkmer 0.5.2

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# See Cargo.toml.orig for the original contents.

[package]
edition = "2021"
name = "rustkmer"
version = "0.5.2"
authors = ["Zhang Tao <forrest_zhang@163.com>"]
build = false
autolib = false
autobins = false
autoexamples = false
autotests = false
autobenches = false
description = "High-performance k-mer counting tool in Rust"
readme = "README.md"
keywords = [
    "bioinformatics",
    "genomics",
    "kmer",
    "sequencing",
]
categories = [
    "science",
    "command-line-utilities",
]
license = "MIT"
repository = "https://github.com/zhangtaolab/rustkmer"

[features]
default = []
disable-zstd = []
profiling = []

[lib]
name = "rustkmer"
crate-type = ["rlib"]
path = "src/lib.rs"

[[bin]]
name = "rustkmer"
path = "src/main.rs"

[[test]]
name = "consistency_tests"
path = "tests/consistency_tests.rs"

[[test]]
name = "mod"
path = "tests/mod.rs"

[dependencies.ahash]
version = "0.8"

[dependencies.anyhow]
version = "1.0"

[dependencies.bincode]
version = "1.3"

[dependencies.bio]
version = "2.0"

[dependencies.byteorder]
version = "1.5"

[dependencies.bzip2]
version = "0.4"

[dependencies.chrono]
version = "0.4"
features = ["serde"]

[dependencies.clap]
version = "4.5.53"
features = ["derive"]

[dependencies.csv]
version = "1.3"

[dependencies.env_logger]
version = "0.11"

[dependencies.flate2]
version = "1.0"
features = ["zlib"]
default-features = false

[dependencies.hashbrown]
version = "0.14"

[dependencies.indicatif]
version = "0.17"

[dependencies.inquire]
version = "0.7"

[dependencies.itertools]
version = "0.14"

[dependencies.log]
version = "0.4"

[dependencies.memmap2]
version = "0.9"

[dependencies.parking_lot]
version = "0.12"

[dependencies.proptest]
version = "1.5"

[dependencies.rayon]
version = "1.8"

[dependencies.serde]
version = "1.0.228"
features = ["derive"]

[dependencies.serde_json]
version = "1.0.145"

[dependencies.sha2]
version = "0.10"

[dependencies.smallvec]
version = "1.13"

[dependencies.sys-info]
version = "0.9"

[dependencies.tdigest]
version = "0.2"

[dependencies.thiserror]
version = "2.0.17"

[dependencies.toml]
version = "0.8"

[dependencies.walkdir]
version = "2.4"

[dependencies.xz2]
version = "0.1"

[dev-dependencies.criterion]
version = "0.5"
features = ["html_reports"]

[dev-dependencies.proptest]
version = "1.5"

[dev-dependencies.rand]
version = "0.8"

[dev-dependencies.rand_chacha]
version = "0.3"

[dev-dependencies.tempfile]
version = "3.12"

[profile.release]
lto = true
codegen-units = 1
panic = "abort"