rustalign-cli 0.2.0

Ultrafast DNA sequence aligner using FM-index and Smith-Waterman
Documentation 
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# THIS FILE IS AUTOMATICALLY GENERATED BY CARGO
#
# When uploading crates to the registry Cargo will automatically
# "normalize" Cargo.toml files for maximal compatibility
# with all versions of Cargo and also rewrite `path` dependencies
# to registry (e.g., crates.io) dependencies.
#
# If you are reading this file be aware that the original Cargo.toml
# will likely look very different (and much more reasonable).
# See Cargo.toml.orig for the original contents.

[package]
edition = "2024"
name = "rustalign-cli"
version = "0.2.0"
authors = ["Zhang Tao <forrest_zhang@163.com>"]
build = false
autolib = false
autobins = false
autoexamples = false
autotests = false
autobenches = false
description = "Ultrafast DNA sequence aligner using FM-index and Smith-Waterman"
readme = false
keywords = [
    "bioinformatics",
    "alignment",
    "dna",
    "sequencing",
    "fm-index",
]
categories = [
    "science",
    "algorithms",
]
license = "MIT"
repository = "https://github.com/zhangtaolab/RustAlign"
resolver = "2"

[lib]
name = "rustalign_cli"
path = "src/lib.rs"

[[bin]]
name = "rustalign"
path = "bin/rustalign.rs"

[[bin]]
name = "rustalign-align"
path = "bin/align.rs"

[[bin]]
name = "rustalign-build"
path = "bin/build.rs"

[[bin]]
name = "rustalign-inspect"
path = "bin/inspect.rs"

[dependencies.anyhow]
version = "1.0"

[dependencies.clap]
version = "4.5"
features = ["derive"]

[dependencies.rayon]
version = "1.10"

[dependencies.rustalign-aligner]
version = "0.2.0"

[dependencies.rustalign-common]
version = "0.2.0"

[dependencies.rustalign-fmindex]
version = "0.2.0"

[dependencies.rustalign-io]
version = "0.2.0"

[dependencies.thiserror]
version = "2.0"