tests:
test-1: "$GREPQ 16S-no-iupac.txt small.fastq"
test-2: "$GREPQ 16S-no-iupac.txt small.fastq inverted"
test-3: "$GREPQ -I 16S-no-iupac.txt small.fastq"
test-4: "$GREPQ -I 16S-no-iupac.txt small.fastq inverted"
test-5: "$GREPQ -R 16S-no-iupac.txt small.fastq"
test-6: "$GREPQ -R 16S-no-iupac.txt small.fastq inverted"
test-7: "$GREPQ -c 16S-no-iupac.txt small.fastq"
test-8: "$GREPQ -c 16S-no-iupac.txt small.fastq inverted"
test-9: "$GREPQ 16S-no-iupac.txt small.fastq tune -n 2000 -c"
test-10: "$GREPQ --read-gzip 16S-no-iupac.json small-copy.fastq.gz tune -n 2000 -c --names --json-matches"
expected_sizes:
test-1: 15953
test-2: 736547
test-3: 19515
test-4: 901271
test-5: 35574
test-6: 1642712
test-7: 53
test-8: 2447
test-9: 310
test-10: 3704