Struct EncoderOption 

pub struct EncoderOption {
    pub bases: Vec<u8>,
}

Options for configuring the FASTA sequence encoder.

This struct provides configuration options for encoding FASTA sequences, such as which bases to consider during encoding.

Fields

• bases - A vector of valid bases (as bytes) to use for encoding. Defaults to “ATCGN”.

Example

use deepbiop_fa::encode::option::EncoderOption;

let options = EncoderOption::default();

Fields

bases: Vec<u8>

Trait Implementations

impl Clone for EncoderOption

fn clone(&self) -> EncoderOption

Returns a duplicate of the value.

fn clone_from(&mut self, source: &Self)

Performs copy-assignment from source.

impl Debug for EncoderOption

fn fmt(&self, f: &mut Formatter<'_>) -> Result

Formats the value using the given formatter.

impl Default for EncoderOption

fn default() -> EncoderOption

Returns the “default value” for a type.

impl<'de> Deserialize<'de> for EncoderOption

fn deserialize<__D>(__deserializer: __D) -> Result<Self, __D::Error>

where __D: Deserializer<'de>,

Deserialize this value from the given Serde deserializer.

impl Display for EncoderOption

fn fmt(&self, f: &mut Formatter<'_>) -> Result

Formats the value using the given formatter.

impl<'py> IntoPyObject<'py> for EncoderOption

type Target = EncoderOption

The Python output type

type Output = Bound<'py, <EncoderOption as IntoPyObject<'py>>::Target>

The smart pointer type to use.

type Error = PyErr

The type returned in the event of a conversion error.

fn into_pyobject( self, py: Python<'py>, ) -> Result<<Self as IntoPyObject<'_>>::Output, <Self as IntoPyObject<'_>>::Error>

Performs the conversion.

impl PyClass for EncoderOption

type Frozen = False

Whether the pyclass is frozen.

impl PyClassImpl for EncoderOption

const IS_BASETYPE: bool = false

#[pyclass(subclass)]

const IS_SUBCLASS: bool = false

#[pyclass(extends=…)]

const IS_MAPPING: bool = false

#[pyclass(mapping)]

const IS_SEQUENCE: bool = false

#[pyclass(sequence)]

const IS_IMMUTABLE_TYPE: bool = false

#[pyclass(immutable_type)]

const RAW_DOC: &'static CStr = /// Options for configuring the FASTA sequence encoder. /// /// This struct provides configuration options for encoding FASTA sequences, /// such as which bases to consider during encoding. /// /// # Fields /// /// * `bases` - A vector of valid bases (as bytes) to use for encoding. Defaults to "ATCGN". /// /// # Example /// /// ``` /// use deepbiop_fa::encode::option::EncoderOption; /// /// let options = EncoderOption::default(); /// ```

Docstring for the class provided on the struct or enum.

const DOC: &'static CStr

Fully rendered class doc, including the text_signature if a constructor is defined.

type BaseType = PyAny

Base class

type ThreadChecker = SendablePyClass<EncoderOption>

This handles following two situations:

type PyClassMutability = <<PyAny as PyClassBaseType>::PyClassMutability as PyClassMutability>::MutableChild

Immutable or mutable

type Dict = PyClassDummySlot

Specify this class has #[pyclass(dict)] or not.

type WeakRef = PyClassDummySlot

Specify this class has #[pyclass(weakref)] or not.

type BaseNativeType = PyAny

The closest native ancestor. This is PyAny by default, and when you declare #[pyclass(extends=PyDict)], it’s PyDict.

fn items_iter() -> PyClassItemsIter

fn lazy_type_object() -> &'static LazyTypeObject<Self>

fn dict_offset() -> Option<isize>

fn weaklist_offset() -> Option<isize>

impl PyClassNewTextSignature for EncoderOption

const TEXT_SIGNATURE: &'static str = "(bases)"

impl PyMethods<EncoderOption> for PyClassImplCollector<EncoderOption>

fn py_methods(self) -> &'static PyClassItems

impl PyStubType for EncoderOption

fn type_output() -> TypeInfo

The type to be used in the output signature, i.e. return type of the Python function or methods.

fn type_input() -> TypeInfo

The type to be used in the input signature, i.e. the arguments of the Python function or methods.

impl PyTypeInfo for EncoderOption

const NAME: &'static str = "EncoderOption"

Class name.

const MODULE: Option<&'static str>

Module name, if any.

fn type_object_raw(py: Python<'_>) -> *mut PyTypeObject

Returns the PyTypeObject instance for this type.

fn type_object(py: Python<'_>) -> Bound<'_, PyType>

Returns the safe abstraction over the type object.

fn is_type_of(object: &Bound<'_, PyAny>) -> bool

Checks if object is an instance of this type or a subclass of this type.

fn is_exact_type_of(object: &Bound<'_, PyAny>) -> bool

Checks if object is an instance of this type.

impl Serialize for EncoderOption

fn serialize<__S>(&self, __serializer: __S) -> Result<__S::Ok, __S::Error>

where __S: Serializer,

Serialize this value into the given Serde serializer.

impl DerefToPyAny for EncoderOption

impl ExtractPyClassWithClone for EncoderOption