bio_tools 0.1.3

Install, run, and inspect computational biology and chemistry tools, e.g. AlphaFold, Boltz, RFdiffusion3, and ProteinMPNN
Documentation
use crate::{
    LaunchType, License, LicenseCategory, ProcessExpense, SpecData, ToolCategory,
    tool_definitions::catalog::{CatalogEntry, Identity},
};

pub const ENTRY: CatalogEntry = CatalogEntry {
    identity: Identity::Uninstalled {
        slug: "rdkit",
        name: "RDKit",
    },
    categories: &[ToolCategory::Cheminformatics],
    launch_type: LaunchType::PythonLib,
    license_type: LicenseCategory::Permissive,
    expense: ProcessExpense::Cheap,
    primary_output: None,
    primary_inputs: &[],
    top_choice: false,
    spec: SpecData {
        summary: "Standardize molecules and turn atom-mapped reactions into explicit bond edits.",
        description: "Deterministic cheminformatics preprocessing for molecule identity, reaction balance, atom-map quality, reaction centers, and bonds formed, broken, or changed before precedent search and enzyme design.",
        availability: "Included Python dependency",
        license_details: "BSD 3-Clause. Commercial use is unrestricted.",
        repo_url: Some("https://github.com/rdkit/rdkit"),
        home_url: Some("https://www.rdkit.org/"),
        docs_url: Some("https://www.rdkit.org/docs/GettingStartedInPython.html"),
        input_params_url: None,
        examples_url: None,
        paper_url: None,
        license: License::Bsd3Clause,
        license_url: None,
        tested: false,
    },
};