Struct FastQSpecs 

pub struct FastQSpecs {
    pub header_specs: StringSpecs,
    pub sequence_specs: NucleotidesSpecs,
    pub same_lengths: bool,
}

Available on crate feature fuzzing only.

Specifications for generating an arbitrary FastQ record.

Fields

header_specs: StringSpecs

The specifications for generating the header.

sequence_specs: NucleotidesSpecs

The specifications for generating the sequence.

same_lengths: bool

Whether to enforce that the sequence and the quality scores are the same length.

Implementations

impl FastQSpecs

pub fn parsable_fastq() -> Self

A constructor for FastQSpecs that ensures the generated FastQ can be parsed by FastQReader.

This includes ensuring that the header only contains graphic ASCII or spaces, that the sequence only contains graphic ASCII, and that the sequence and quality scores are the same length.

Trait Implementations

impl<'a> ArbitrarySpecs<'a> for FastQSpecs

type Output = FastQ

The type of the arbitrary data that this specification generates.

fn make_arbitrary(&self, u: &mut Unstructured<'a>) -> Result<Self::Output>

Generates arbitrary data conforming to the given specifications.

fn make_arbitrary_iter<'b>( &self, u: &'b mut Unstructured<'a>, ) -> MakeArbitraryIter<'a, 'b, '_, Self>

Generates an iterator of arbitrary data, each item conforming to the given specifications.

impl Clone for FastQSpecs

fn clone(&self) -> FastQSpecs

Returns a duplicate of the value.

fn clone_from(&mut self, source: &Self)

Performs copy-assignment from source.

impl Debug for FastQSpecs

fn fmt(&self, f: &mut Formatter<'_>) -> Result

Formats the value using the given formatter.

impl Default for FastQSpecs

fn default() -> FastQSpecs

Returns the “default value” for a type.

impl Eq for FastQSpecs

impl Hash for FastQSpecs

fn hash<__H: Hasher>(&self, state: &mut __H)

Feeds this value into the given Hasher.

fn hash_slice<H>(data: &[Self], state: &mut H)

where H: Hasher, Self: Sized,

Feeds a slice of this type into the given Hasher.

impl PartialEq for FastQSpecs

fn eq(&self, other: &FastQSpecs) -> bool

Equality operator ==.

fn ne(&self, other: &Rhs) -> bool

Inequality operator !=.

impl StructuralPartialEq for FastQSpecs