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FindingCode

Enum FindingCode 

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#[non_exhaustive]
pub enum FindingCode {
Show 17 variants RingBridgedComplexity, RingSpiro, RingFusedDense, RingMacrocycle, SizeLargeMolecularWeight, SizeHighRotatableBondCount, StereoCenterCount, StereoDensityHigh, StereoAnalysisSkipped, FunctionalGroupReactive, FunctionalGroupDense, FragmentPrecedentWeak, FragmentPrecedentStrong, InputUnsupportedElement, InputDisconnected, InputUnusualValence, InputTooLarge,
}
Expand description

Machine-readable finding code (AGENTS.md §8.1). Only variants the currently-implemented components emit exist so far; codes for not-yet-implemented components are added alongside those components.

Variants (Non-exhaustive)§

This enum is marked as non-exhaustive
Non-exhaustive enums could have additional variants added in future. Therefore, when matching against variants of non-exhaustive enums, an extra wildcard arm must be added to account for any future variants.
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RingBridgedComplexity

A bridged polycyclic ring system (bridgehead connectivity).

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RingSpiro

A spiro ring junction (two rings sharing exactly one atom).

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RingFusedDense

A fused ring system whose fusion density is above the threshold.

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RingMacrocycle

A ring at or above the macrocycle size threshold.

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SizeLargeMolecularWeight

Molecular weight above the size threshold.

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SizeHighRotatableBondCount

Rotatable bond count above the threshold.

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StereoCenterCount

At least one tetrahedral stereocenter is present (specified or unspecified — see evidence.value for the count).

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StereoDensityHigh

Stereocenter density (centers per heavy atom) above the threshold.

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StereoAnalysisSkipped

Stereo analysis could not be run at all for this molecule. Not reachable as of chematic 0.13.0 — the one trigger condition (a negatively charged atom, chematic#267) was an upstream bug, fixed directly rather than worked around. Kept in the schema for compatibility (#[non_exhaustive]), same policy as this project’s other retired-but-not-removed codes.

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FunctionalGroupReactive

A Brenk et al. (2008) reactive/unstable structural alert matched — the specific alert name is in explanation, not a separate code (AGENTS.md §8.1: one generic code per component concern, not one per pattern).

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FunctionalGroupDense

Distinct functional-group cluster count (Ertl 2017) above the threshold.

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FragmentPrecedentWeak

This molecule’s fragments sit at a low percentile of the configured crate::FragmentCorpus’s (AnalysisConfig.fragment_model) own mean-document-frequency distribution — i.e. this molecule’s fragments are, relative to the reference corpus, weakly precedented (unusually rare). Only ever produced when a corpus is configured. Explanatory only since round 21 (option C) — does not contribute to overall.difficulty and never appears in dominant_penalties/dominant_supports; see FragmentPrecedentEvidence and rules.rs’s “Fragment precedent” section for why (round 20 found the corpus-relative signal too corpus-sensitive to trust as a scoring input). The opposite -direction case is FindingCode::FragmentPrecedentStrong.

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FragmentPrecedentStrong

This molecule’s fragments sit at a high percentile of the configured crate::FragmentCorpus’s own mean-document-frequency distribution — unusually strong precedent relative to the reference corpus. Only ever produced when a corpus is configured. Explanatory only since round 21 (option C) — same as FindingCode::FragmentPrecedentWeak, does not contribute to overall.difficulty and never appears in dominant_penalties/ dominant_supports.

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InputUnsupportedElement

The molecule contains an element outside yomitoki’s supported set.

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InputDisconnected

The molecule consists of disconnected fragments.

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InputUnusualValence

At least one atom has a valence outside normal ranges for its element.

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InputTooLarge

Heavy-atom count exceeds AnalysisConfig.max_heavy_atoms.

Trait Implementations§

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impl Clone for FindingCode

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fn clone(&self) -> FindingCode

Returns a duplicate of the value. Read more
1.0.0 (const: unstable) · Source§

fn clone_from(&mut self, source: &Self)

Performs copy-assignment from source. Read more
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impl Copy for FindingCode

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impl Debug for FindingCode

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fn fmt(&self, f: &mut Formatter<'_>) -> Result

Formats the value using the given formatter. Read more
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impl<'de> Deserialize<'de> for FindingCode

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fn deserialize<__D>(__deserializer: __D) -> Result<Self, __D::Error>
where __D: Deserializer<'de>,

Deserialize this value from the given Serde deserializer. Read more
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impl Eq for FindingCode

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impl Hash for FindingCode

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fn hash<__H: Hasher>(&self, state: &mut __H)

Feeds this value into the given Hasher. Read more
1.3.0 · Source§

fn hash_slice<H>(data: &[Self], state: &mut H)
where H: Hasher, Self: Sized,

Feeds a slice of this type into the given Hasher. Read more
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impl Ord for FindingCode

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fn cmp(&self, other: &FindingCode) -> Ordering

This method returns an Ordering between self and other. Read more
1.21.0 (const: unstable) · Source§

fn max(self, other: Self) -> Self
where Self: Sized,

Compares and returns the maximum of two values. Read more
1.21.0 (const: unstable) · Source§

fn min(self, other: Self) -> Self
where Self: Sized,

Compares and returns the minimum of two values. Read more
1.50.0 (const: unstable) · Source§

fn clamp(self, min: Self, max: Self) -> Self
where Self: Sized,

Restrict a value to a certain interval. Read more
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impl PartialEq for FindingCode

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fn eq(&self, other: &FindingCode) -> bool

Equality operator ==. Read more
1.0.0 (const: unstable) · Source§

fn ne(&self, other: &Rhs) -> bool

Inequality operator !=. Read more
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impl PartialOrd for FindingCode

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fn partial_cmp(&self, other: &FindingCode) -> Option<Ordering>

This method returns an ordering between self and other values if one exists. Read more
1.0.0 (const: unstable) · Source§

fn lt(&self, other: &Rhs) -> bool

Tests less than (for self and other) and is used by the < operator. Read more
1.0.0 (const: unstable) · Source§

fn le(&self, other: &Rhs) -> bool

Tests less than or equal to (for self and other) and is used by the <= operator. Read more
1.0.0 (const: unstable) · Source§

fn gt(&self, other: &Rhs) -> bool

Tests greater than (for self and other) and is used by the > operator. Read more
1.0.0 (const: unstable) · Source§

fn ge(&self, other: &Rhs) -> bool

Tests greater than or equal to (for self and other) and is used by the >= operator. Read more
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impl Serialize for FindingCode

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fn serialize<__S>(&self, __serializer: __S) -> Result<__S::Ok, __S::Error>
where __S: Serializer,

Serialize this value into the given Serde serializer. Read more
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impl StructuralPartialEq for FindingCode

Auto Trait Implementations§

Blanket Implementations§

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impl<T> Any for T
where T: 'static + ?Sized,

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fn type_id(&self) -> TypeId

Gets the TypeId of self. Read more
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impl<T> Borrow<T> for T
where T: ?Sized,

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fn borrow(&self) -> &T

Immutably borrows from an owned value. Read more
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impl<T> BorrowMut<T> for T
where T: ?Sized,

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fn borrow_mut(&mut self) -> &mut T

Mutably borrows from an owned value. Read more
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impl<T> CloneToUninit for T
where T: Clone,

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unsafe fn clone_to_uninit(&self, dest: *mut u8)

🔬This is a nightly-only experimental API. (clone_to_uninit)
Performs copy-assignment from self to dest. Read more
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impl<T> DeserializeOwned for T
where T: for<'de> Deserialize<'de>,

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impl<T> From<T> for T

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fn from(t: T) -> T

Returns the argument unchanged.

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impl<T, U> Into<U> for T
where U: From<T>,

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fn into(self) -> U

Calls U::from(self).

That is, this conversion is whatever the implementation of From<T> for U chooses to do.

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impl<T> Same for T

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type Output = T

Should always be Self
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impl<T> ToOwned for T
where T: Clone,

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type Owned = T

The resulting type after obtaining ownership.
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fn to_owned(&self) -> T

Creates owned data from borrowed data, usually by cloning. Read more
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fn clone_into(&self, target: &mut T)

Uses borrowed data to replace owned data, usually by cloning. Read more
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impl<T, U> TryFrom<U> for T
where U: Into<T>,

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type Error = Infallible

The type returned in the event of a conversion error.
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fn try_from(value: U) -> Result<T, <T as TryFrom<U>>::Error>

Performs the conversion.
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impl<T, U> TryInto<U> for T
where U: TryFrom<T>,

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type Error = <U as TryFrom<T>>::Error

The type returned in the event of a conversion error.
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fn try_into(self) -> Result<U, <U as TryFrom<T>>::Error>

Performs the conversion.