Enum IndelRegion 

pub enum IndelRegion {
    Cds {
        cds_offset_start: u32,
        cds_offset_end: u32,
    },
    FivePrimeUtr,
    ThreePrimeUtr,
    Intron,
    NonCodingExon,
    Upstream,
    Downstream,
    BoundarySpanning,
}

Primary region for an indel footprint.

Cds uses half-open convention: [cds_offset_start, cds_offset_end).

Variants

Cds

Entirely within a CDS exon. Offsets are 0-based, half-open.

Fields

cds_offset_start: u32

0-based CDS offset of the first affected coding base.

cds_offset_end: u32

0-based exclusive end (first unaffected offset).

FivePrimeUtr

Entirely within the 5’ UTR.

ThreePrimeUtr

Entirely within the 3’ UTR.

Intron

Entirely within an intron.

NonCodingExon

Entirely within a non-coding exon.

Upstream

Upstream of the transcript.

Downstream

Downstream of the transcript.

BoundarySpanning

Spans a region boundary: exon/intron, CDS/UTR, or multi-exon.

Trait Implementations

impl Clone for IndelRegion

fn clone(&self) -> IndelRegion

Returns a duplicate of the value.

fn clone_from(&mut self, source: &Self)

Performs copy-assignment from source.

impl Debug for IndelRegion

fn fmt(&self, f: &mut Formatter<'_>) -> Result

Formats the value using the given formatter.

impl PartialEq for IndelRegion

fn eq(&self, other: &IndelRegion) -> bool

Tests for self and other values to be equal, and is used by ==.

fn ne(&self, other: &Rhs) -> bool

Tests for !=. The default implementation is almost always sufficient, and should not be overridden without very good reason.

impl Eq for IndelRegion

impl StructuralPartialEq for IndelRegion