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BayesianQuadrature

Struct BayesianQuadrature 

Source
pub struct BayesianQuadrature { /* private fields */ }
Expand description

Bayesian quadrature with an RBF covariance kernel and Gaussian integration measure.

The current implementation assumes a zero Gaussian-process prior mean. This is intentionally explicit rather than hidden behind a generic prior-mean abstraction.

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impl BayesianQuadrature

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pub const fn new( kernel: RbfKernel, measure: GaussianMeasure, jitter: f64, ) -> Self

Construct the first supported Bayesian quadrature configuration.

Examples found in repository?
examples/bayesian_quadrature.rs (line 13)
7fn main() -> Result<(), Box<dyn std::error::Error>> {
8    // Prior over the integrand: zero-mean Gaussian process with an RBF kernel.
9    let kernel = RbfKernel::new(1.0, 1.0)?; // signal variance, length scale
10    // Integration measure p(x) = N(0, 1).
11    let measure = GaussianMeasure::new(0.0, 1.0)?;
12    // Jitter is an explicit, fixed diagonal regularizer. It is never escalated silently.
13    let quadrature = BayesianQuadrature::new(kernel, measure, 1.0e-10);
14
15    // Observe f(x) = cos(x) at seven nodes. Exactly, E[cos X] = exp(-1/2) for X ~ N(0, 1).
16    let nodes = [-3.0, -2.0, -1.0, 0.0, 1.0, 2.0, 3.0];
17    let values: Vec<f64> = nodes.iter().copied().map(f64::cos).collect();
18    let exact = (-0.5_f64).exp();
19
20    let posterior = quadrature.posterior(&nodes, &values)?;
21    let standardized_error = (posterior.mean() - exact).abs() / posterior.standard_deviation();
22
23    println!("E[I | y]           = {:.6}", posterior.mean());
24    println!(
25        "sd[I | y]          = {:.3e}",
26        posterior.standard_deviation()
27    );
28    println!("exact integral     = {exact:.6}");
29    println!("standardized error = {standardized_error:.3}");
30
31    // The posterior is honest about its own error here: the exact value lies well
32    // inside the reported uncertainty.
33    assert!((posterior.mean() - exact).abs() < 3.0 * posterior.standard_deviation());
34    Ok(())
35}
More examples
Hide additional examples
examples/active_quadrature.rs (line 18)
15fn main() -> Result<(), Box<dyn std::error::Error>> {
16    let kernel = RbfKernel::new(1.0, 1.0)?;
17    let measure = GaussianMeasure::new(0.0, 1.0)?;
18    let quadrature = BayesianQuadrature::new(kernel, measure, 1.0e-10);
19    let active = ActiveBayesianQuadrature::new(quadrature);
20
21    // Start from three evaluations; allow up to six more from a fixed candidate grid,
22    // stopping early once the posterior variance of the integral drops below 1e-6.
23    let initial_nodes = [-1.0, 0.0, 1.0];
24    let initial_values: Vec<f64> = initial_nodes.iter().copied().map(integrand).collect();
25    let candidates: Vec<f64> = (0..=23).map(|i| -2.875 + 0.25 * f64::from(i)).collect();
26
27    let initial = quadrature.posterior(&initial_nodes, &initial_values)?;
28    println!("initial posterior variance = {:.3e}", initial.variance());
29
30    let result = active.run(
31        &initial_nodes,
32        &initial_values,
33        &candidates,
34        6,
35        1.0e-6,
36        integrand,
37    )?;
38
39    for step in result.steps() {
40        println!(
41            "x = {:+.3}  predicted reduction = {:.3e}  posterior variance = {:.3e}",
42            step.point(),
43            step.predicted_variance_reduction(),
44            step.posterior_variance(),
45        );
46    }
47
48    let exact = (1.0_f64 / 3.0).sqrt() * (-0.25_f64 / 3.0).exp();
49    let posterior = result.posterior();
50    println!("stopped because: {:?}", result.termination());
51    println!(
52        "E[I | y] = {:.6} ± {:.3e}   (exact {exact:.6})",
53        posterior.mean(),
54        posterior.standard_deviation(),
55    );
56    Ok(())
57}
Source

pub const fn kernel(&self) -> RbfKernel

Return the RBF kernel.

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pub const fn measure(&self) -> GaussianMeasure

Return the Gaussian integration measure.

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pub const fn jitter(&self) -> f64

Return the fixed diagonal jitter used by Gaussian conditioning.

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pub fn posterior( &self, nodes: &[f64], values: &[f64], ) -> Result<ScalarNormalPosterior, BayesianQuadratureError>

Compute the posterior distribution of the integral from observed function values.

For observations y = f(X) and zero prior mean,

posterior_mean = z^T (K + jitter I)^(-1) y
posterior_var  = kappa - z^T (K + jitter I)^(-1) z

The inverse is never formed explicitly; both systems are solved from one reusable Cholesky factorization.

§Errors

Returns BayesianQuadratureError for invalid observations, conditioning failures, or an invalid posterior variance.

Examples found in repository?
examples/bayesian_quadrature.rs (line 20)
7fn main() -> Result<(), Box<dyn std::error::Error>> {
8    // Prior over the integrand: zero-mean Gaussian process with an RBF kernel.
9    let kernel = RbfKernel::new(1.0, 1.0)?; // signal variance, length scale
10    // Integration measure p(x) = N(0, 1).
11    let measure = GaussianMeasure::new(0.0, 1.0)?;
12    // Jitter is an explicit, fixed diagonal regularizer. It is never escalated silently.
13    let quadrature = BayesianQuadrature::new(kernel, measure, 1.0e-10);
14
15    // Observe f(x) = cos(x) at seven nodes. Exactly, E[cos X] = exp(-1/2) for X ~ N(0, 1).
16    let nodes = [-3.0, -2.0, -1.0, 0.0, 1.0, 2.0, 3.0];
17    let values: Vec<f64> = nodes.iter().copied().map(f64::cos).collect();
18    let exact = (-0.5_f64).exp();
19
20    let posterior = quadrature.posterior(&nodes, &values)?;
21    let standardized_error = (posterior.mean() - exact).abs() / posterior.standard_deviation();
22
23    println!("E[I | y]           = {:.6}", posterior.mean());
24    println!(
25        "sd[I | y]          = {:.3e}",
26        posterior.standard_deviation()
27    );
28    println!("exact integral     = {exact:.6}");
29    println!("standardized error = {standardized_error:.3}");
30
31    // The posterior is honest about its own error here: the exact value lies well
32    // inside the reported uncertainty.
33    assert!((posterior.mean() - exact).abs() < 3.0 * posterior.standard_deviation());
34    Ok(())
35}
More examples
Hide additional examples
examples/active_quadrature.rs (line 27)
15fn main() -> Result<(), Box<dyn std::error::Error>> {
16    let kernel = RbfKernel::new(1.0, 1.0)?;
17    let measure = GaussianMeasure::new(0.0, 1.0)?;
18    let quadrature = BayesianQuadrature::new(kernel, measure, 1.0e-10);
19    let active = ActiveBayesianQuadrature::new(quadrature);
20
21    // Start from three evaluations; allow up to six more from a fixed candidate grid,
22    // stopping early once the posterior variance of the integral drops below 1e-6.
23    let initial_nodes = [-1.0, 0.0, 1.0];
24    let initial_values: Vec<f64> = initial_nodes.iter().copied().map(integrand).collect();
25    let candidates: Vec<f64> = (0..=23).map(|i| -2.875 + 0.25 * f64::from(i)).collect();
26
27    let initial = quadrature.posterior(&initial_nodes, &initial_values)?;
28    println!("initial posterior variance = {:.3e}", initial.variance());
29
30    let result = active.run(
31        &initial_nodes,
32        &initial_values,
33        &candidates,
34        6,
35        1.0e-6,
36        integrand,
37    )?;
38
39    for step in result.steps() {
40        println!(
41            "x = {:+.3}  predicted reduction = {:.3e}  posterior variance = {:.3e}",
42            step.point(),
43            step.predicted_variance_reduction(),
44            step.posterior_variance(),
45        );
46    }
47
48    let exact = (1.0_f64 / 3.0).sqrt() * (-0.25_f64 / 3.0).exp();
49    let posterior = result.posterior();
50    println!("stopped because: {:?}", result.termination());
51    println!(
52        "E[I | y] = {:.6} ± {:.3e}   (exact {exact:.6})",
53        posterior.mean(),
54        posterior.standard_deviation(),
55    );
56    Ok(())
57}

Trait Implementations§

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impl Clone for BayesianQuadrature

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fn clone(&self) -> BayesianQuadrature

Returns a duplicate of the value. Read more
1.0.0 (const: unstable) · Source§

fn clone_from(&mut self, source: &Self)

Performs copy-assignment from source. Read more
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impl Copy for BayesianQuadrature

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impl Debug for BayesianQuadrature

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fn fmt(&self, f: &mut Formatter<'_>) -> Result

Formats the value using the given formatter. Read more
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impl PartialEq for BayesianQuadrature

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fn eq(&self, other: &BayesianQuadrature) -> bool

Equality operator ==. Read more
1.0.0 (const: unstable) · Source§

fn ne(&self, other: &Rhs) -> bool

Inequality operator !=. Read more
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impl StructuralPartialEq for BayesianQuadrature

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unsafe fn clone_to_uninit(&self, dest: *mut u8)

🔬This is a nightly-only experimental API. (clone_to_uninit)
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