pub struct DedupConfig {Show 17 fields
pub method: DedupMethod,
pub ignore_umi: bool,
pub umi_separator: u8,
pub random_seed: u64,
pub out_sam: bool,
pub chrom: Option<String>,
pub edit_distance_threshold: u32,
pub subset: Option<f32>,
pub extract_umi_method: String,
pub umi_tag: Option<String>,
pub per_gene: bool,
pub gene_tag: Option<String>,
pub skip_tags_regex: Option<String>,
pub output_stats: Option<String>,
pub paired: bool,
pub ignore_tlen: bool,
pub umi_whitelist: Option<HashSet<Vec<u8>>>,
}Fields§
§method: DedupMethod§ignore_umi: bool§umi_separator: u8§random_seed: u64§out_sam: bool§chrom: Option<String>§edit_distance_threshold: u32§subset: Option<f32>§extract_umi_method: String§umi_tag: Option<String>§per_gene: bool§gene_tag: Option<String>§output_stats: Option<String>§paired: bool§ignore_tlen: bool§umi_whitelist: Option<HashSet<Vec<u8>>>Auto Trait Implementations§
impl Freeze for DedupConfig
impl RefUnwindSafe for DedupConfig
impl Send for DedupConfig
impl Sync for DedupConfig
impl Unpin for DedupConfig
impl UnsafeUnpin for DedupConfig
impl UnwindSafe for DedupConfig
Blanket Implementations§
Source§impl<T> BorrowMut<T> for Twhere
T: ?Sized,
impl<T> BorrowMut<T> for Twhere
T: ?Sized,
Source§fn borrow_mut(&mut self) -> &mut T
fn borrow_mut(&mut self) -> &mut T
Mutably borrows from an owned value. Read more