Struct umgap::io::fasta::Reader

pub struct Reader<R: Read> { /* private fields */ }

Reads a FASTA-formatted source (e.g. a file).

Implementations

impl<R: Read> Reader<R>

pub fn new(reader: R, unwrap: bool) -> Self

Creates a Reader from the given Read (e.g. a file). When unwrap is true, the reader will unwrap the input sequences by removing newlines between the sequence lines (each Record.sequence) will only have one item. When unwrap is false, each record line will be a new item in the Record.sequence vec.

pub fn read_record(&mut self) -> Result<Option<Record>>

Reads the next record from the FASTA file.

pub fn records(self) -> Records<R>

Returns a Records struct with itself as its reader.