Struct sourmash::cmd::ComputeParameters

pub struct ComputeParameters { /* private fields */ }

Implementations

impl ComputeParameters

pub fn builder( ) -> ComputeParametersBuilder<((), (), (), (), (), (), (), (), (), (), (), (), (), (), (), (), (), (), ())>

Create a builder for building ComputeParameters. On the builder, call .ksizes(...)(optional), .check_sequence(...)(optional), .dna(...)(optional), .dayhoff(...)(optional), .hp(...)(optional), .singleton(...)(optional), .scaled(...)(optional), .force(...)(optional), .output(...)(optional), .num_hashes(...)(optional), .protein(...)(optional), .name_from_first(...)(optional), .seed(...)(optional), .input_is_protein(...)(optional), .merge(...)(optional), .track_abundance(...)(optional), .randomize(...)(optional), .license(...)(optional), .processes(...)(optional) to set the values of the fields. Finally, call .build() to create the instance of ComputeParameters.

impl ComputeParameters

pub fn check_sequence(&self) -> bool

pub fn dna(&self) -> bool

pub fn dayhoff(&self) -> bool

pub fn hp(&self) -> bool

pub fn singleton(&self) -> bool

pub fn scaled(&self) -> u64

pub fn force(&self) -> bool

pub fn num_hashes(&self) -> u32

pub fn protein(&self) -> bool

pub fn name_from_first(&self) -> bool

pub fn seed(&self) -> u64

pub fn input_is_protein(&self) -> bool

pub fn track_abundance(&self) -> bool

pub fn randomize(&self) -> bool

pub fn processes(&self) -> usize

impl ComputeParameters

pub fn ksizes(&self) -> &Vec<u32>

pub fn output(&self) -> &Option<String>

pub fn merge(&self) -> &Option<String>

pub fn license(&self) -> &String

impl ComputeParameters

pub fn set_ksizes(&mut self, val: Vec<u32>) -> &mut Self

pub fn set_check_sequence(&mut self, val: bool) -> &mut Self

pub fn set_dna(&mut self, val: bool) -> &mut Self

pub fn set_dayhoff(&mut self, val: bool) -> &mut Self

pub fn set_hp(&mut self, val: bool) -> &mut Self

pub fn set_singleton(&mut self, val: bool) -> &mut Self

pub fn set_scaled(&mut self, val: u64) -> &mut Self

pub fn set_force(&mut self, val: bool) -> &mut Self

pub fn set_output(&mut self, val: Option<String>) -> &mut Self

pub fn set_num_hashes(&mut self, val: u32) -> &mut Self

pub fn set_protein(&mut self, val: bool) -> &mut Self

pub fn set_name_from_first(&mut self, val: bool) -> &mut Self

pub fn set_seed(&mut self, val: u64) -> &mut Self

pub fn set_input_is_protein(&mut self, val: bool) -> &mut Self

pub fn set_merge(&mut self, val: Option<String>) -> &mut Self

pub fn set_track_abundance(&mut self, val: bool) -> &mut Self

pub fn set_randomize(&mut self, val: bool) -> &mut Self

pub fn set_license(&mut self, val: String) -> &mut Self

pub fn set_processes(&mut self, val: usize) -> &mut Self

Trait Implementations

impl Default for ComputeParameters

fn default() -> Self

Returns the “default value” for a type.