Struct QueryAlignment

pub struct QueryAlignment(pub Vec<TargetAlignment>);

Tuple Fields

0: Vec<TargetAlignment>

Implementations

impl QueryAlignment

pub fn to_json(&self) -> String

pub fn to_json_pretty(&self) -> String

pub fn write_as_json<W: Write>(&self, writer: W)

pub fn write_as_json_pretty<W: Write>(&self, writer: W)

pub fn from_json(s: &str) -> Result<Self, Error>

impl QueryAlignment

pub fn count_alignments(&self) -> usize

impl QueryAlignment

pub fn deduplicated(self) -> Self

Deduplicate the alignments by connected (Match or Subst) base pairs positions.

Trait Implementations

impl Clone for QueryAlignment

fn clone(&self) -> QueryAlignment

Returns a duplicate of the value.

fn clone_from(&mut self, source: &Self)

Performs copy-assignment from source.

impl Debug for QueryAlignment

fn fmt(&self, f: &mut Formatter<'_>) -> Result

Formats the value using the given formatter.

impl<'de> Deserialize<'de> for QueryAlignment

fn deserialize<__D>(__deserializer: __D) -> Result<Self, __D::Error>

where __D: Deserializer<'de>,

Deserialize this value from the given Serde deserializer.

impl Serialize for QueryAlignment

fn serialize<__S>(&self, __serializer: __S) -> Result<__S::Ok, __S::Error>

where __S: Serializer,

Serialize this value into the given Serde serializer.