Struct MotifConfig 

pub struct MotifConfig {
    pub min_length: usize,
    pub max_length: usize,
    pub min_occurrences: usize,
    pub min_confidence: f32,
    pub allow_overlap: bool,
    pub max_gap: usize,
}

Configuration for motif detection.

Fields

min_length: usize

Minimum length of motifs to detect.

max_length: usize

Maximum length of motifs to detect.

min_occurrences: usize

Minimum number of occurrences for a motif.

min_confidence: f32

Minimum confidence threshold for motifs.

allow_overlap: bool

Whether to allow overlapping occurrences.

max_gap: usize

Maximum gap (in clusters) between motif elements.

Implementations

impl MotifConfig

pub fn strict() -> Self

Create a strict motif configuration (no gaps, no overlap).

pub fn relaxed() -> Self

Create a relaxed motif configuration (allows gaps).

pub fn with_length_range(self, min: usize, max: usize) -> Self

Set the length range.

Trait Implementations

impl Clone for MotifConfig

fn clone(&self) -> MotifConfig

Returns a duplicate of the value.

fn clone_from(&mut self, source: &Self)

Performs copy-assignment from source.

impl Debug for MotifConfig

fn fmt(&self, f: &mut Formatter<'_>) -> Result

Formats the value using the given formatter.

impl Default for MotifConfig

fn default() -> Self

Returns the “default value” for a type.

impl<'de> Deserialize<'de> for MotifConfig

fn deserialize<__D>(__deserializer: __D) -> Result<Self, __D::Error>

where __D: Deserializer<'de>,

Deserialize this value from the given Serde deserializer.

impl Serialize for MotifConfig

fn serialize<__S>(&self, __serializer: __S) -> Result<__S::Ok, __S::Error>

where __S: Serializer,

Serialize this value into the given Serde serializer.