Struct SampleArgs

pub struct SampleArgs {
    pub in_fq: Option<String>,
    pub in_fa: Option<String>,
    pub random_seed: Option<usize>,
    pub sample_fraction: Option<f64>,
}

Fields

in_fq: Option<String>

Input fastq path

in_fa: Option<String>

Input fasta path

random_seed: Option<usize>

Set the seed for the random number generator. This value ensures reproducibility of the sampling process. (This option takes effect only when used in conjunction with –sample-fraction / -f.) [default: 4]

sample_fraction: Option<f64>

Specify the fraction of the total dataset to sample. The value is a FLOAT between 0 and 1. For example, a value of 0.1 will sample 10% of the data.

Trait Implementations

impl Args for SampleArgs

fn group_id() -> Option<Id>

Report the ArgGroup::id for this set of arguments

fn augment_args<'b>(__clap_app: Command) -> Command

Append to Command so it can instantiate Self via FromArgMatches::from_arg_matches_mut

fn augment_args_for_update<'b>(__clap_app: Command) -> Command

Append to Command so it can instantiate self via FromArgMatches::update_from_arg_matches_mut

impl FromArgMatches for SampleArgs

fn from_arg_matches(__clap_arg_matches: &ArgMatches) -> Result<Self, Error>

Instantiate Self from ArgMatches, parsing the arguments as needed.

fn from_arg_matches_mut( __clap_arg_matches: &mut ArgMatches, ) -> Result<Self, Error>

Instantiate Self from ArgMatches, parsing the arguments as needed.

fn update_from_arg_matches( &mut self, __clap_arg_matches: &ArgMatches, ) -> Result<(), Error>

Assign values from ArgMatches to self.

fn update_from_arg_matches_mut( &mut self, __clap_arg_matches: &mut ArgMatches, ) -> Result<(), Error>

Assign values from ArgMatches to self.