Struct TSNE

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pub struct TSNE { /* private fields */ }
Expand description

t-SNE (t-distributed Stochastic Neighbor Embedding) for dimensionality reduction

t-SNE is a nonlinear dimensionality reduction technique well-suited for embedding high-dimensional data for visualization in a low-dimensional space (typically 2D or 3D). It models each high-dimensional object by a two- or three-dimensional point in such a way that similar objects are modeled by nearby points and dissimilar objects are modeled by distant points with high probability.

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impl TSNE

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pub fn new() -> Self

Creates a new t-SNE instance with default parameters

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pub fn with_n_components(self, n_components: usize) -> Self

Sets the number of components in the embedded space

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pub fn with_perplexity(self, perplexity: f64) -> Self

Sets the perplexity parameter

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pub fn with_early_exaggeration(self, early_exaggeration: f64) -> Self

Sets the early exaggeration factor

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pub fn with_learning_rate(self, learning_rate: f64) -> Self

Sets the learning rate for gradient descent

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pub fn with_max_iter(self, max_iter: usize) -> Self

Sets the maximum number of iterations

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pub fn with_n_iter_without_progress( self, n_iter_without_progress: usize, ) -> Self

Sets the number of iterations without progress before early stopping

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pub fn with_min_grad_norm(self, min_grad_norm: f64) -> Self

Sets the minimum gradient norm for convergence

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pub fn with_metric(self, metric: &str) -> Self

Sets the metric for pairwise distance computation

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pub fn with_method(self, method: &str) -> Self

Sets the method for dimensionality reduction

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pub fn with_init(self, init: &str) -> Self

Sets the initialization method

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pub fn with_angle(self, angle: f64) -> Self

Sets the angle for Barnes-Hut approximation

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pub fn with_n_jobs(self, n_jobs: i32) -> Self

Sets the number of parallel jobs to run

  • n_jobs = -1: Use all available cores
  • n_jobs = 1: Use single-core (disable multicore)
  • n_jobs > 1: Use specific number of cores
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pub fn with_verbose(self, verbose: bool) -> Self

Sets the verbosity level

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pub fn with_random_state(self, random_state: u64) -> Self

Sets the random state for reproducibility

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pub fn fit_transform<S>(&mut self, x: &ArrayBase<S, Ix2>) -> Result<Array2<f64>>
where S: Data, S::Elem: Float + NumCast,

Fit t-SNE to input data and transform it to the embedded space

§Arguments
  • x - Input data, shape (n_samples, n_features)
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  • Result<Array2<f64>> - Embedding of the training data, shape (n_samples, n_components)
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pub fn embedding(&self) -> Option<&Array2<f64>>

Returns the embedding after fitting

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pub fn kl_divergence(&self) -> Option<f64>

Returns the KL divergence after optimization

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pub fn n_iter(&self) -> Option<usize>

Returns the number of iterations run

Trait Implementations§

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impl Default for TSNE

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fn default() -> Self

Returns the “default value” for a type. Read more

Auto Trait Implementations§

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impl Freeze for TSNE

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impl RefUnwindSafe for TSNE

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impl Send for TSNE

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impl Sync for TSNE

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impl Unpin for TSNE

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impl UnwindSafe for TSNE

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impl<T> Any for T
where T: 'static + ?Sized,

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fn type_id(&self) -> TypeId

Gets the TypeId of self. Read more
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impl<T> Borrow<T> for T
where T: ?Sized,

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fn borrow(&self) -> &T

Immutably borrows from an owned value. Read more
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impl<T> BorrowMut<T> for T
where T: ?Sized,

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fn borrow_mut(&mut self) -> &mut T

Mutably borrows from an owned value. Read more
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impl<T> From<T> for T

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fn from(t: T) -> T

Returns the argument unchanged.

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impl<T, U> Into<U> for T
where U: From<T>,

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fn into(self) -> U

Calls U::from(self).

That is, this conversion is whatever the implementation of From<T> for U chooses to do.

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impl<T> IntoEither for T

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fn into_either(self, into_left: bool) -> Either<Self, Self>

Converts self into a Left variant of Either<Self, Self> if into_left is true. Converts self into a Right variant of Either<Self, Self> otherwise. Read more
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fn into_either_with<F>(self, into_left: F) -> Either<Self, Self>
where F: FnOnce(&Self) -> bool,

Converts self into a Left variant of Either<Self, Self> if into_left(&self) returns true. Converts self into a Right variant of Either<Self, Self> otherwise. Read more
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impl<T> Pointable for T

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const ALIGN: usize

The alignment of pointer.
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type Init = T

The type for initializers.
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unsafe fn init(init: <T as Pointable>::Init) -> usize

Initializes a with the given initializer. Read more
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unsafe fn deref<'a>(ptr: usize) -> &'a T

Dereferences the given pointer. Read more
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unsafe fn deref_mut<'a>(ptr: usize) -> &'a mut T

Mutably dereferences the given pointer. Read more
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unsafe fn drop(ptr: usize)

Drops the object pointed to by the given pointer. Read more
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impl<T, U> TryFrom<U> for T
where U: Into<T>,

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type Error = Infallible

The type returned in the event of a conversion error.
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fn try_from(value: U) -> Result<T, <T as TryFrom<U>>::Error>

Performs the conversion.
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impl<T, U> TryInto<U> for T
where U: TryFrom<T>,

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type Error = <U as TryFrom<T>>::Error

The type returned in the event of a conversion error.
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fn try_into(self) -> Result<U, <U as TryFrom<T>>::Error>

Performs the conversion.
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impl<V, T> VZip<V> for T
where V: MultiLane<T>,

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fn vzip(self) -> V