Module ode 

Ordinary Differential Equation solvers

This module provides numerical solvers for ordinary differential equations (ODEs). It includes a variety of methods for solving initial value problems (IVPs).

Features:

• Multiple methods including explicit and implicit solvers
• Automatic stiffness detection and method switching
• Dense output for continuous solution approximation
• Event detection and handling for detecting specific conditions
• Support for different error control schemes

Re-exports

pub use self::types::MassMatrix;

pub use self::types::MassMatrixType;

pub use self::types::ODEMethod;

pub use self::types::ODEOptions;

pub use self::types::ODEResult;

pub use self::chemical::systems as chemical_systems;

pub use self::chemical::ChemicalConfig;

pub use self::chemical::ChemicalIntegrator;

pub use self::chemical::ChemicalProperties;

pub use self::chemical::ChemicalState;

pub use self::chemical::ChemicalSystemType;

pub use self::chemical::Reaction;

pub use self::chemical::ReactionType;

pub use self::enzyme_kinetics::pathways as metabolic_pathways;

pub use self::enzyme_kinetics::EnzymeDefinition;

pub use self::enzyme_kinetics::EnzymeMechanism;

pub use self::enzyme_kinetics::EnzymeParameters;

pub use self::enzyme_kinetics::MetabolicPathway;

pub use self::enzyme_kinetics::PathwayAnalysis;

pub use self::enzyme_kinetics::RegulationType;

pub use self::chemical_equilibrium::systems as equilibrium_systems;

pub use self::chemical_equilibrium::ActivityModel;

pub use self::chemical_equilibrium::EquilibriumCalculator;

pub use self::chemical_equilibrium::EquilibriumResult;

pub use self::chemical_equilibrium::EquilibriumType;

pub use self::chemical_equilibrium::ThermoData;

pub use self::mechanical::systems as mechanical_systems;

pub use self::mechanical::MechanicalConfig;

pub use self::mechanical::MechanicalIntegrator;

pub use self::mechanical::MechanicalProperties;

pub use self::mechanical::MechanicalSystemType;

pub use self::mechanical::RigidBodyState;

pub use self::solver::solve_ivp;

pub use self::solver::solve_ivp_with_events;

pub use self::utils::events::terminal_event;

pub use self::utils::events::EventAction;

pub use self::utils::events::EventDirection;

pub use self::utils::events::EventSpec;

pub use self::utils::events::ODEOptionsWithEvents;

pub use self::utils::events::ODEResultWithEvents;

pub use self::multirate::MultirateMethod;

pub use self::multirate::MultirateOptions;

pub use self::multirate::MultirateSolver;

pub use self::multirate::MultirateSystem;

Modules

chemical

Chemical kinetics integration methods

chemical_equilibrium

Chemical equilibrium calculation methods

enzyme_kinetics

Advanced enzyme kinetics and metabolic pathway modeling

mechanical

Mechanical systems integration methods

methods

ODE solver implementations.

multirate

Multirate Methods for ODEs with Multiple Timescales

solver

ODE solver interface

types

Types for ODE solver module

utils

Utility functions for ODE solvers.