Struct FastaExporter 

pub struct FastaExporter { /* private fields */ }

Serializes SBOL 3 Documents to FASTA.

Records are emitted in document order: each Component’s referenced sequences first (headed by the component’s display ID and description), then any sequences not referenced by a component (headed by their own display ID). Sequences without elements are skipped.

Implementations

impl FastaExporter

pub fn new() -> Self

Builds an exporter that wraps sequence bodies at 70 columns.

pub fn with_line_width(self, width: usize) -> Self

Sets the column at which sequence bodies wrap. A width of 0 is treated as 1 to avoid emitting empty lines.

pub fn to_string(&self, document: &Document) -> String

Renders the document to a FASTA string.

pub fn write<W: Write>( &self, document: &Document, writer: &mut W, ) -> Result<ExportReport, ExportError>

Writes FASTA to an arbitrary writer, returning a tally of records.

pub fn write_path( &self, document: &Document, path: impl AsRef<Path>, ) -> Result<ExportReport, ExportError>

Writes FASTA to a file on disk.

Trait Implementations

impl Clone for FastaExporter

fn clone(&self) -> FastaExporter

Returns a duplicate of the value.

fn clone_from(&mut self, source: &Self)

Performs copy-assignment from source.

impl Debug for FastaExporter

fn fmt(&self, f: &mut Formatter<'_>) -> Result

Formats the value using the given formatter.

impl Default for FastaExporter

fn default() -> Self

Returns the “default value” for a type.