Enum MateStatus 

pub enum MateStatus {
    PairedEndLeft,
    PairedEndRight,
    PairedEndPaired,
    SingleEnd,
}

Which part(s) of a fragment a mapping accounts for.

Variants

PairedEndLeft

only the left/first mate of a pair mapped

PairedEndRight

only the right/second mate of a pair mapped

PairedEndPaired

both mates mapped as a proper pair

SingleEnd

single-end read

Implementations

impl MateStatus

pub fn is_orphan(&self) -> bool

True when only one mate of a pair contributed (an orphan mapping).

pub fn is_paired(&self) -> bool

True for a properly paired mapping.

Trait Implementations

impl Clone for MateStatus

fn clone(&self) -> MateStatus

Returns a duplicate of the value.

fn clone_from(&mut self, source: &Self)

Performs copy-assignment from source.

impl Copy for MateStatus

impl Debug for MateStatus

fn fmt(&self, f: &mut Formatter<'_>) -> Result

Formats the value using the given formatter.

impl<'de> Deserialize<'de> for MateStatus

fn deserialize<__D>(__deserializer: __D) -> Result<Self, __D::Error>

where __D: Deserializer<'de>,

Deserialize this value from the given Serde deserializer.

impl Eq for MateStatus

impl Hash for MateStatus

fn hash<__H: Hasher>(&self, state: &mut __H)

Feeds this value into the given Hasher.

fn hash_slice<H>(data: &[Self], state: &mut H)

where H: Hasher, Self: Sized,

Feeds a slice of this type into the given Hasher.

impl PartialEq for MateStatus

fn eq(&self, other: &MateStatus) -> bool

Tests for self and other values to be equal, and is used by ==.

fn ne(&self, other: &Rhs) -> bool

Tests for !=. The default implementation is almost always sufficient, and should not be overridden without very good reason.

impl Serialize for MateStatus

fn serialize<__S>(&self, __serializer: __S) -> Result<__S::Ok, __S::Error>

where __S: Serializer,

Serialize this value into the given Serde serializer.

impl StructuralPartialEq for MateStatus