SpikeTrain

Struct SpikeTrain 

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pub struct SpikeTrain {
    pub neuron_id: usize,
    pub spike_times: Vec<SimTime>,
    pub max_window: f64,
}
Expand description

A collection of spikes over time for one neuron

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§neuron_id: usize

Neuron ID

§spike_times: Vec<SimTime>

Spike times (sorted)

§max_window: f64

Maximum time window to keep

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impl SpikeTrain

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pub fn new(neuron_id: usize) -> Self

Create a new empty spike train

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pub fn with_window(neuron_id: usize, max_window: f64) -> Self

Create with custom window size

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pub fn record_spike(&mut self, time: SimTime)

Record a spike at given time

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pub fn clear(&mut self)

Clear all recorded spikes

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pub fn count(&self) -> usize

Get number of spikes in the train

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pub fn spike_rate(&self, window: f64) -> f64

Compute instantaneous spike rate (spikes/ms)

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pub fn mean_isi(&self) -> Option<f64>

Compute inter-spike interval statistics

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pub fn cv_isi(&self) -> Option<f64>

Get coefficient of variation of ISI

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pub fn to_pattern( &self, start: SimTime, bin_size: f64, num_bins: usize, ) -> Vec<bool>

Convert spike train to binary pattern (temporal encoding)

Safely handles potential overflow in bin calculation.

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pub fn cross_correlation( &self, other: &SpikeTrain, max_lag: f64, bin_size: f64, ) -> Vec<f64>

Compute cross-correlation with another spike train

Uses O(n log n) sliding window algorithm instead of O(n²) pairwise comparison. Optimized to skip sorting when spike trains are already sorted (typical case). Uses binary search for initial window position.

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impl Clone for SpikeTrain

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fn clone(&self) -> SpikeTrain

Returns a duplicate of the value. Read more
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fn clone_from(&mut self, source: &Self)

Performs copy-assignment from source. Read more
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impl Debug for SpikeTrain

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fn fmt(&self, f: &mut Formatter<'_>) -> Result

Formats the value using the given formatter. Read more

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impl<T> Any for T
where T: 'static + ?Sized,

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fn borrow_mut(&mut self) -> &mut T

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impl<T> CloneToUninit for T
where T: Clone,

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unsafe fn clone_to_uninit(&self, dest: *mut u8)

🔬This is a nightly-only experimental API. (clone_to_uninit)
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const ALIGN: usize

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type Init = T

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unsafe fn init(init: <T as Pointable>::Init) -> usize

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fn vzip(self) -> V