Struct FastqRecord 

pub struct FastqRecord {
    pub id: String,
    pub seq: Vec<Nuc>,
    pub qual: Vec<u8>,
}

A FASTQ record

Fields

id: String

Read ID (header line without @)

seq: Vec<Nuc>

Sequence data

qual: Vec<u8>

Quality scores (Phred+33 decoded)

Implementations

impl FastqRecord

pub fn new(id: String, seq: Vec<Nuc>, qual: Vec<u8>) -> Self

Create a new FASTQ record

pub fn len(&self) -> usize

Get the read length

pub fn is_empty(&self) -> bool

Check if read is empty

pub fn validate(&self) -> AlignResult<()>

Validate that sequence and quality lengths match

Trait Implementations

impl Clone for FastqRecord

fn clone(&self) -> FastqRecord

Returns a duplicate of the value.

fn clone_from(&mut self, source: &Self)

Performs copy-assignment from source.

impl Debug for FastqRecord

fn fmt(&self, f: &mut Formatter<'_>) -> Result

Formats the value using the given formatter.