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QueryProfile

rustalign_aligner

Struct QueryProfile 

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pub struct QueryProfile { /* private fields */ }
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Query profile for SIMD alignment

This holds the scoring matrices for each reference character, organized for efficient SIMD lookup.

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impl QueryProfile

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pub fn build(read: &[Nuc], match_score: i16, mismatch_penalty: i16) -> Self

Build a query profile for the given read

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impl Debug for QueryProfile

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fn fmt(&self, f: &mut Formatter<'_>) -> Result

Formats the value using the given formatter. Read more

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impl<T> Any for T
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fn type_id(&self) -> TypeId

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fn borrow(&self) -> &T

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fn borrow_mut(&mut self) -> &mut T

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impl<T> From<T> for T

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fn from(t: T) -> T

Returns the argument unchanged.

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impl<T, U> Into<U> for T
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fn into(self) -> U

Calls U::from(self).

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impl<T, U> TryFrom<U> for T
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type Error = Infallible

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impl<T, U> TryInto<U> for T
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type Error = <U as TryFrom<T>>::Error

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fn try_into(self) -> Result<U, <U as TryFrom<T>>::Error>

Performs the conversion.