Struct lib::alignment_lib::Penalties

pub struct Penalties {
    pub mismatch_pen: i32,
    pub open_pen: i32,
    pub extd_pen: i32,
}

Holds penalties scores. There is no match penalty: matches do not change the score. The penalty for any gap is length * extd_pen + open_pen. The extension pen is also applied when a gap is opened. Penalties should be a positive int.

Fields

mismatch_pen: i32

open_pen: i32

extd_pen: i32

Trait Implementations

impl Debug for Penalties

fn fmt(&self, f: &mut Formatter<'_>) -> Result

Formats the value using the given formatter.

impl PartialEq<Penalties> for Penalties

fn eq(&self, other: &Penalties) -> bool

This method tests for self and other values to be equal, and is used by ==.

fn ne(&self, other: &Penalties) -> bool

This method tests for !=.

impl Eq for Penalties

impl StructuralEq for Penalties

impl StructuralPartialEq for Penalties