Struct rust_sbml::Objective

pub struct Objective {
    pub id: String,
    pub metaid: Option<String>,
    pub sbo_term: Option<String>,
    pub sense: String,
    pub list_of_flux_objectives: ListOfFluxObjectives,
}

The Flux Balance Constraints package of SBML defines extensions for the model, including the FBC Objective.

See the FBC specification for more details.

Example

use quick_xml::de::from_str;
use rust_sbml::Objective;

let objectives: Vec<Objective> = from_str(
"<fbc:objective fbc:id=\"obj1\" fbc:type=\"maximize\">
    <fbc:listOfFluxObjectives>
        <fbc:fluxObjective fbc:reaction=\"R101\" fbc:coefficient=\"1\"/>
    </fbc:listOfFluxObjectives>
</fbc:objective>
<fbc:objective fbc:id=\"obj2\" fbc:type=\"minimize\">
    <fbc:listOfFluxObjectives>
        <fbc:fluxObjective fbc:reaction=\"R102\" fbc:coefficient=\"-2.5\"/>
        <fbc:fluxObjective fbc:reaction=\"R103\" fbc:coefficient=\"1\"/>
    </fbc:listOfFluxObjectives>
</fbc:objective>").unwrap();

objectives.iter().any(|o| o.sense == "maximize");
objectives[1].list_of_flux_objectives.flux_objectives.iter().any(|r| r.reaction.to_owned().unwrap() == "R103");

Fields

id: String

metaid: Option<String>

sbo_term: Option<String>

sense: String

list_of_flux_objectives: ListOfFluxObjectives

Trait Implementations

impl Clone for Objective

fn clone(&self) -> Objective

Returns a copy of the value.

pub fn clone_from(&mut self, source: &Self)

Performs copy-assignment from source.

impl Debug for Objective

fn fmt(&self, f: &mut Formatter<'_>) -> Result

Formats the value using the given formatter.

impl Default for Objective

fn default() -> Objective

Returns the “default value” for a type.

impl<'de> Deserialize<'de> for Objective

fn deserialize<__D>(__deserializer: __D) -> Result<Self, __D::Error> where
    __D: Deserializer<'de>, 

Deserialize this value from the given Serde deserializer.

impl PartialEq<Objective> for Objective

fn eq(&self, other: &Objective) -> bool

This method tests for self and other values to be equal, and is used by ==.

fn ne(&self, other: &Objective) -> bool

This method tests for !=.

impl Serialize for Objective

fn serialize<__S>(&self, __serializer: __S) -> Result<__S::Ok, __S::Error> where
    __S: Serializer, 

Serialize this value into the given Serde serializer.

impl StructuralPartialEq for Objective