Enum rust_htslib::bam::errors::Error

pub enum Error {
    ParseCigar {
        msg: String,
    },
    UnexpectedCigarOperation {
        msg: String,
    },
    ParseSAM {
        rec: String,
    },
    SetThreads,
    InvalidReferencePath {
        path: PathBuf,
    },
    InvalidCompressionLevel {
        level: u32,
    },
    FileNotFound {
        path: PathBuf,
    },
    NonUnicodePath,
    Open {
        target: String,
    },
    InvalidIndex {
        target: String,
    },
    Write,
    InvalidRecord,
    TruncatedRecord,
    Fetch,
    Seek,
    UnknownSequence {
        sequence: String,
    },
    NotIndexable,
    WriteIndex,
    BuildIndex,
    Pileup,
}

Variants

ParseCigar

Fields of ParseCigar

msg: String

UnexpectedCigarOperation

Fields of UnexpectedCigarOperation

msg: String

ParseSAM

Fields of ParseSAM

rec: String

SetThreads

InvalidReferencePath

Fields of InvalidReferencePath

path: PathBuf

InvalidCompressionLevel

Fields of InvalidCompressionLevel

level: u32

FileNotFound

Fields of FileNotFound

path: PathBuf

NonUnicodePath

Open

Fields of Open

target: String

InvalidIndex

Fields of InvalidIndex

target: String

Write

InvalidRecord

TruncatedRecord

Fetch

Seek

UnknownSequence

Fields of UnknownSequence

sequence: String

NotIndexable

WriteIndex

BuildIndex

Pileup

Trait Implementations

impl PartialEq<Error> for Error

fn eq(&self, other: &Error) -> bool

This method tests for self and other values to be equal, and is used by ==.

fn ne(&self, other: &Error) -> bool

This method tests for !=.

impl Debug for Error

fn fmt(&self, f: &mut Formatter) -> Result

Formats the value using the given formatter.

impl Display for Error

fn fmt(&self, f: &mut Formatter) -> Result

Formats the value using the given formatter.

impl Error for Error where
    Self: Debug + Display, 

fn description(&self) -> &str

This method is soft-deprecated.

fn cause(&self) -> Option<&dyn Error>

Deprecated since 1.33.0:

replaced by Error::source, which can support downcasting

The lower-level cause of this error, if any.

fn source(&self) -> Option<&(dyn Error + 'static)>

The lower-level source of this error, if any.

fn backtrace(&self) -> Option<&Backtrace>

🔬 This is a nightly-only experimental API. (backtrace)

Returns a stack backtrace, if available, of where this error ocurred.

impl ErrorCompat for Error

fn backtrace(&self) -> Option<&Backtrace>

Returns a Backtrace that may be printed.

impl<__T0> IntoError<Error> for ParseCigar<__T0> where
    Error: Error + ErrorCompat,
    __T0: Into<String>, 

type Source = NoneError

The underlying error

fn into_error(self, error: Self::Source) -> Error

Combine the information to produce the error

impl<__T0> IntoError<Error> for UnexpectedCigarOperation<__T0> where
    Error: Error + ErrorCompat,
    __T0: Into<String>, 

type Source = NoneError

The underlying error

fn into_error(self, error: Self::Source) -> Error

Combine the information to produce the error

impl<__T0> IntoError<Error> for ParseSAM<__T0> where
    Error: Error + ErrorCompat,
    __T0: Into<String>, 

type Source = NoneError

The underlying error

fn into_error(self, error: Self::Source) -> Error

Combine the information to produce the error

impl IntoError<Error> for SetThreads where
    Error: Error + ErrorCompat, 

type Source = NoneError

The underlying error

fn into_error(self, error: Self::Source) -> Error

Combine the information to produce the error

impl<__T0> IntoError<Error> for InvalidReferencePath<__T0> where
    Error: Error + ErrorCompat,
    __T0: Into<PathBuf>, 

type Source = NoneError

The underlying error

fn into_error(self, error: Self::Source) -> Error

Combine the information to produce the error

impl<__T0> IntoError<Error> for InvalidCompressionLevel<__T0> where
    Error: Error + ErrorCompat,
    __T0: Into<u32>, 

type Source = NoneError

The underlying error

fn into_error(self, error: Self::Source) -> Error

Combine the information to produce the error

impl<__T0> IntoError<Error> for FileNotFound<__T0> where
    Error: Error + ErrorCompat,
    __T0: Into<PathBuf>, 

type Source = NoneError

The underlying error

fn into_error(self, error: Self::Source) -> Error

Combine the information to produce the error

impl IntoError<Error> for NonUnicodePath where
    Error: Error + ErrorCompat, 

type Source = NoneError

The underlying error

fn into_error(self, error: Self::Source) -> Error

Combine the information to produce the error

impl<__T0> IntoError<Error> for Open<__T0> where
    Error: Error + ErrorCompat,
    __T0: Into<String>, 

type Source = NoneError

The underlying error

fn into_error(self, error: Self::Source) -> Error

Combine the information to produce the error

impl<__T0> IntoError<Error> for InvalidIndex<__T0> where
    Error: Error + ErrorCompat,
    __T0: Into<String>, 

type Source = NoneError

The underlying error

fn into_error(self, error: Self::Source) -> Error

Combine the information to produce the error

impl IntoError<Error> for Write where
    Error: Error + ErrorCompat, 

type Source = NoneError

The underlying error

fn into_error(self, error: Self::Source) -> Error

Combine the information to produce the error

impl IntoError<Error> for InvalidRecord where
    Error: Error + ErrorCompat, 

type Source = NoneError

The underlying error

fn into_error(self, error: Self::Source) -> Error

Combine the information to produce the error

impl IntoError<Error> for TruncatedRecord where
    Error: Error + ErrorCompat, 

type Source = NoneError

The underlying error

fn into_error(self, error: Self::Source) -> Error

Combine the information to produce the error

impl IntoError<Error> for Fetch where
    Error: Error + ErrorCompat, 

type Source = NoneError

The underlying error

fn into_error(self, error: Self::Source) -> Error

Combine the information to produce the error

impl IntoError<Error> for Seek where
    Error: Error + ErrorCompat, 

type Source = NoneError

The underlying error

fn into_error(self, error: Self::Source) -> Error

Combine the information to produce the error

impl<__T0> IntoError<Error> for UnknownSequence<__T0> where
    Error: Error + ErrorCompat,
    __T0: Into<String>, 

type Source = NoneError

The underlying error

fn into_error(self, error: Self::Source) -> Error

Combine the information to produce the error

impl IntoError<Error> for NotIndexable where
    Error: Error + ErrorCompat, 

type Source = NoneError

The underlying error

fn into_error(self, error: Self::Source) -> Error

Combine the information to produce the error

impl IntoError<Error> for WriteIndex where
    Error: Error + ErrorCompat, 

type Source = NoneError

The underlying error

fn into_error(self, error: Self::Source) -> Error

Combine the information to produce the error

impl IntoError<Error> for BuildIndex where
    Error: Error + ErrorCompat, 

type Source = NoneError

The underlying error

fn into_error(self, error: Self::Source) -> Error

Combine the information to produce the error

impl IntoError<Error> for Pileup where
    Error: Error + ErrorCompat, 

type Source = NoneError

The underlying error

fn into_error(self, error: Self::Source) -> Error

Combine the information to produce the error