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AftFit

Struct AftFit 

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pub struct AftFit { /* private fields */ }
Expand description

A fitted accelerated failure time (AFT) parametric survival model,

log Tᵢ = xᵢᵀβ + σ·Wᵢ,

where W has the standard AftDistribution. Unlike the semiparametric Cox model this specifies the full baseline, so it yields absolute time predictions (e.g. median survival) and coefficients read as log time-acceleration: exp(βⱼ) > 1 multiplies survival time. Fit by maximum likelihood over right-censored data (Nelder–Mead on the log-likelihood, with standard errors from the numerical observed information).

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impl AftFit

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pub fn new( time: Array1<f64>, event: Array1<f64>, x: Array2<f64>, dist: AftDistribution, ) -> Result<Self>

Fit an AFT model of survival (time, event) on X under dist.

event[i] is 1.0 for an observed event, 0.0 for right-censoring. X carries the fixed effects including an intercept (the model has a location term). Returns the standard-error covariance for the β coefficients (the scale is reported separately).

§Errors
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pub fn distribution(&self) -> AftDistribution

The assumed distribution.

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pub fn n_observations(&self) -> usize

Number of observations.

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pub fn n_parameters(&self) -> usize

Number of coefficients (design columns).

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pub fn coefficients(&self) -> ArrayView1<'_, f64>

AFT coefficients β (log time-acceleration scale), aligned to the design columns.

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pub fn scale(&self) -> f64

The scale parameter σ (1 for the exponential).

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pub fn covariance(&self) -> ArrayView2<'_, f64>

Coefficient covariance (inverse observed information).

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pub fn log_likelihood(&self) -> f64

Maximized log-likelihood.

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pub fn aic(&self) -> f64

AIC, −2ℓ + 2k, counting the scale parameter unless it is fixed.

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pub fn coefficient_standard_errors(&self) -> Array1<f64>

Coefficient standard errors √diag(cov).

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pub fn z_values(&self) -> Array1<f64>

Wald z-statistics βⱼ / seⱼ.

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pub fn p_values(&self) -> Array1<f64>

Two-sided Wald p-values from the standard normal.

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pub fn predict_median(&self, x: ArrayView2<'_, f64>) -> Array1<f64>

Predicted median survival time for a new design matrix x: exp(xβ + σ·median(W)).

Trait Implementations§

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impl Clone for AftFit

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fn clone(&self) -> AftFit

Returns a duplicate of the value. Read more
1.0.0 (const: unstable) · Source§

fn clone_from(&mut self, source: &Self)

Performs copy-assignment from source. Read more
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impl Debug for AftFit

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fn fmt(&self, f: &mut Formatter<'_>) -> Result

Formats the value using the given formatter. Read more

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impl<T> Any for T
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unsafe fn clone_to_uninit(&self, dest: *mut u8)

🔬This is a nightly-only experimental API. (clone_to_uninit)
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type Output = T

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fn vzip(self) -> V