Struct InMemorySequenceStore 

pub struct InMemorySequenceStore { /* private fields */ }

An in-memory sequence store suitable for testing and small datasets.

Implementations

impl InMemorySequenceStore

pub fn new() -> Self

Create a new empty store.

pub fn add(&mut self, metadata: SequenceMetadata, sequence: Vec<u8>)

Add a sequence to the store.

Trait Implementations

impl Default for InMemorySequenceStore

fn default() -> Self

Returns the “default value” for a type.

impl SequenceStore for InMemorySequenceStore

fn get_sequence( &self, digest: &str, start: Option<u64>, end: Option<u64>, ) -> StoreResult<Option<Vec<u8>>>

Retrieve sequence bases by digest (MD5 or sha512t24u). Supports optional start/end for subsequence retrieval (0-based, half-open).

fn get_metadata(&self, digest: &str) -> StoreResult<Option<SequenceMetadata>>

Retrieve metadata for a sequence by digest.

fn get_length(&self, digest: &str) -> StoreResult<Option<u64>>

Retrieve the length of a sequence by digest.