Enum Suggestion 

pub enum Suggestion {
    RenameContigs {
        command_hint: String,
    },
    ReorderContigs {
        command_hint: String,
    },
    ReplaceContig {
        contig_name: String,
        reason: String,
        source: String,
    },
    UseAsIs {
        warnings: Vec<String>,
    },
    Realign {
        reason: String,
        suggested_reference: String,
    },
}

Variants

RenameContigs

Rename contigs using fgbio or similar

Fields

command_hint: String

ReorderContigs

Reorder contigs to match reference

Fields

command_hint: String

ReplaceContig

Replace a specific contig (e.g., mito)

Fields

contig_name: String

reason: String

source: String

UseAsIs

Reference is a close match, safe to use

Fields

warnings: Vec<String>

Realign

Need to realign with different reference

Fields

reason: String

suggested_reference: String

Trait Implementations

impl Clone for Suggestion

fn clone(&self) -> Suggestion

Returns a duplicate of the value.

fn clone_from(&mut self, source: &Self)

Performs copy-assignment from source.

impl Debug for Suggestion

fn fmt(&self, f: &mut Formatter<'_>) -> Result

Formats the value using the given formatter.