Struct ReportContig 

pub struct ReportContig {
    pub id: u32,
    pub sequence_name: String,
    pub length: u64,
    pub md5: Option<String>,
    pub refseq_accn: Option<String>,
    pub genbank_accn: Option<String>,
    pub ucsc_name: Option<String>,
    pub sequence_role: SequenceRole,
    pub assigned_molecule: Option<String>,
}

A contig from an assembly report (canonical definition)

Fields

id: u32

Internal ID for linking to FastaContig

sequence_name: String

Primary sequence name

length: u64

Sequence length

md5: Option<String>

MD5 checksum if known

refseq_accn: Option<String>

RefSeq accession (e.g., “NC_000001.11”)

genbank_accn: Option<String>

GenBank accession (e.g., “CM000663.2”)

ucsc_name: Option<String>

UCSC-style name (e.g., “chr1”)

sequence_role: SequenceRole

Sequence role

assigned_molecule: Option<String>

Assigned molecule (e.g., “1”, “X”, “MT”)

Trait Implementations

impl Clone for ReportContig

fn clone(&self) -> ReportContig

Returns a duplicate of the value.

fn clone_from(&mut self, source: &Self)

Performs copy-assignment from source.

impl Debug for ReportContig

fn fmt(&self, f: &mut Formatter<'_>) -> Result

Formats the value using the given formatter.

impl<'de> Deserialize<'de> for ReportContig

fn deserialize<__D>(__deserializer: __D) -> Result<Self, __D::Error>

where __D: Deserializer<'de>,

Deserialize this value from the given Serde deserializer.

impl PartialEq for ReportContig

fn eq(&self, other: &ReportContig) -> bool

Tests for self and other values to be equal, and is used by ==.

fn ne(&self, other: &Rhs) -> bool

Tests for !=. The default implementation is almost always sufficient, and should not be overridden without very good reason.

impl Serialize for ReportContig

fn serialize<__S>(&self, __serializer: __S) -> Result<__S::Ok, __S::Error>

where __S: Serializer,

Serialize this value into the given Serde serializer.

impl StructuralPartialEq for ReportContig