Struct ContigMetadata 

pub struct ContigMetadata {
    pub primary_name: String,
    pub length: Option<u64>,
    pub md5: Option<String>,
    pub aliases: HashSet<String>,
    pub assembly: Option<String>,
    pub uri: Option<String>,
    pub species: Option<String>,
    pub sequence_role: SequenceRole,
    pub sources: Vec<String>,
}

Metadata for a single contig, collected from multiple sources

Fields

primary_name: String

Primary name (exact, from first source)

length: Option<u64>

Length (must be consistent across sources)

md5: Option<String>

MD5 checksum

aliases: HashSet<String>

Explicit aliases (from AN tag or NCBI report)

assembly: Option<String>

Assembly tag (AS)

uri: Option<String>

URI (UR)

species: Option<String>

Species (SP)

sequence_role: SequenceRole

Sequence role from NCBI assembly report

sources: Vec<String>

Sources that contributed to this contig

Trait Implementations

impl Clone for ContigMetadata

fn clone(&self) -> ContigMetadata

Returns a duplicate of the value.

fn clone_from(&mut self, source: &Self)

Performs copy-assignment from source.

impl Debug for ContigMetadata

fn fmt(&self, f: &mut Formatter<'_>) -> Result

Formats the value using the given formatter.