pub struct BamProcessorConfig {
pub min_mapping_quality: u8,
pub min_base_quality: u8,
pub stranded: bool,
pub max_depth: u32,
pub umi_tag: String,
pub cell_barcode_tag: String,
}Expand description
Configuration for BAM processing
Fields§
§min_mapping_quality: u8Minimum mapping quality for a read to be considered
min_base_quality: u8Minimum base quality for a base to be counted
stranded: boolWhether the data is stranded (true) or unstranded (false)
max_depth: u32Maximum pileup depth to examine per genomic position
umi_tag: StringTag name for UMI (Unique Molecular Identifier)
cell_barcode_tag: StringTag name for cell barcode
Trait Implementations§
Source§impl Clone for BamProcessorConfig
impl Clone for BamProcessorConfig
Source§fn clone(&self) -> BamProcessorConfig
fn clone(&self) -> BamProcessorConfig
Returns a duplicate of the value. Read more
1.0.0 · Source§fn clone_from(&mut self, source: &Self)
fn clone_from(&mut self, source: &Self)
Performs copy-assignment from
source. Read moreSource§impl Debug for BamProcessorConfig
impl Debug for BamProcessorConfig
Auto Trait Implementations§
impl Freeze for BamProcessorConfig
impl RefUnwindSafe for BamProcessorConfig
impl Send for BamProcessorConfig
impl Sync for BamProcessorConfig
impl Unpin for BamProcessorConfig
impl UnsafeUnpin for BamProcessorConfig
impl UnwindSafe for BamProcessorConfig
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impl<T> BorrowMut<T> for Twhere
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fn borrow_mut(&mut self) -> &mut T
Mutably borrows from an owned value. Read more
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fn into_either_with<F>(self, into_left: F) -> Either<Self, Self>
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The inclusion map: converts
self to the equivalent element of its superset.Source§impl<SS, SP> SupersetOf<SS> for SPwhere
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impl<SS, SP> SupersetOf<SS> for SPwhere
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fn from_subset(element: &SS) -> SP
The inclusion map: converts
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