Struct read_structure::ReadSegment
source · [−]pub struct ReadSegment {
pub length: Option<usize>,
pub kind: SegmentType,
/* private fields */
}Expand description
The read segment describing a given kind (SegmentType), optional length, and offset of the
bases within a crate::read_structure::ReadStructure.
Fields
length: Option<usize>The optional length of this segment
kind: SegmentTypeThe segment type
Implementations
sourceimpl ReadSegment
impl ReadSegment
sourcepub fn extract_bases<'a, B>(
&self,
bases: &'a [B]
) -> Result<&'a [B], ReadStructureError>
pub fn extract_bases<'a, B>(
&self,
bases: &'a [B]
) -> Result<&'a [B], ReadStructureError>
Extract the bases corresponding to this ReadSegment from a slice.
Errors
- If the segment does not fall wholely within the slice.
sourcepub fn extract_bases_and_quals<'a, B, Q>(
&self,
bases: &'a [B],
quals: &'a [Q]
) -> Result<(&'a [B], &'a [Q]), ReadStructureError>
pub fn extract_bases_and_quals<'a, B, Q>(
&self,
bases: &'a [B],
quals: &'a [Q]
) -> Result<(&'a [B], &'a [Q]), ReadStructureError>
Extract the bases and corresponding quals to this ReadSegment from a slice.
Errors
- If the segment does not fall wholely within the slice.
- If the bases and quals lengths are not equal.
sourcepub fn has_length(&self) -> bool
pub fn has_length(&self) -> bool
Returns true if the read segment has a length defined (i.e. not None)
Trait Implementations
sourceimpl Clone for ReadSegment
impl Clone for ReadSegment
sourcefn clone(&self) -> ReadSegment
fn clone(&self) -> ReadSegment
Returns a copy of the value. Read more
1.0.0 · sourcefn clone_from(&mut self, source: &Self)
fn clone_from(&mut self, source: &Self)
Performs copy-assignment from source. Read more
sourceimpl Debug for ReadSegment
impl Debug for ReadSegment
sourceimpl Display for ReadSegment
impl Display for ReadSegment
sourcefn fmt(&self, f: &mut Formatter<'_>) -> Result
fn fmt(&self, f: &mut Formatter<'_>) -> Result
Formats the ReadSegment as a string.
sourceimpl FromStr for ReadSegment
impl FromStr for ReadSegment
sourcefn from_str(s: &str) -> Result<Self, Self::Err>
fn from_str(s: &str) -> Result<Self, Self::Err>
Builds a ReadSegment from a string representation. The character representation
of SegmentType must be the last character, while the leading character(s) either
a non-zero integer, or the any-length character.
Errors
Returns Err if the string was too short, if the length could not be parsed, or if
the segment type could not be recognized.
type Err = ReadStructureError
type Err = ReadStructureError
The associated error which can be returned from parsing.
sourceimpl PartialEq<ReadSegment> for ReadSegment
impl PartialEq<ReadSegment> for ReadSegment
sourcefn eq(&self, other: &ReadSegment) -> bool
fn eq(&self, other: &ReadSegment) -> bool
This method tests for self and other values to be equal, and is used
by ==. Read more
sourcefn ne(&self, other: &ReadSegment) -> bool
fn ne(&self, other: &ReadSegment) -> bool
This method tests for !=.
impl Copy for ReadSegment
impl StructuralPartialEq for ReadSegment
Auto Trait Implementations
impl RefUnwindSafe for ReadSegment
impl Send for ReadSegment
impl Sync for ReadSegment
impl Unpin for ReadSegment
impl UnwindSafe for ReadSegment
Blanket Implementations
sourceimpl<T> BorrowMut<T> for T where
T: ?Sized,
impl<T> BorrowMut<T> for T where
T: ?Sized,
const: unstable · sourcefn borrow_mut(&mut self) -> &mut T
fn borrow_mut(&mut self) -> &mut T
Mutably borrows from an owned value. Read more
sourceimpl<T> ToOwned for T where
T: Clone,
impl<T> ToOwned for T where
T: Clone,
type Owned = T
type Owned = T
The resulting type after obtaining ownership.
sourcefn clone_into(&self, target: &mut T)
fn clone_into(&self, target: &mut T)
toowned_clone_into)Uses borrowed data to replace owned data, usually by cloning. Read more